Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8562g00002 ATGGAAGAAGCAAAAAAAAATTACACAAACTATGCCATTAGATGTGTATATGTTGTGCGCATAAGAACATCTAAAAAAGATAACAACAACAATGTCAACTACTTGAGATTAGTTTGCTCAAGGGAAGGGAAATATGTCTCTTCAATCAAGCCTGAGGTGAAAACACTTCCTAGCCAAACCAACCAATGTCCAACTGGCATAACCATTGCAAGGAAGGATGATAAATGGTTTATAAGGACCGTTGTCCTAGACCACAGTCATGATCTATGCCCAAAAACCTCCAAGCTAATTCCTGGCAATAGGAAATTGAGCATGCAAGCTAAACGCACATTGGAGGTCAATGATGATGCTGGAGTCCGGATTAATAAGAGTTTCCTTAGCATTATGAGCGATGCAGGTGGATTTGAAAATATGGACTTCATAGAGCGAGATGCGCGAAACTACATTGGCCAATACATAAGATCTTTATGTAAGGATGGTGATGGACAAGCCCTCCTACGACACTTTCCATCAATGAAAGATTTCAATAACGATTTCTTTTATGAAATTGTATTGTATGAAGGCAATACAATTTGTAGTGTCTTTTGGGCAGATGCAAGAACTCGAGACGCCTGTGAAGAATTTGGTGATGTGGTGTCTTTCAACACCACTTACTTAACAAATAAGTATGACATGCCATTTGCGCCTTTCGTCAGAGTTAACCATCATGTTGATCGTGAAACAAAGAAACGAAGGCCATCTTCTTCTCGTGATGGACGTCGTCGCCAACGCAATCCAACACCATCCCCACCATCATCCCCACCACCACCAAACAATGAACTTTTCTCCTCTGATGAACAATATGAGAAATTTGCAAACCATTTTTTCAATTGTGAAATATTGGAAAGCAAATATCTCGAAGATGCTTACTTTGAAGGAAGAAATTTTCAATTCTACGACATATTGTCTGAGGCTGGGCTGACGAAATTTGTGTCCTTAAATAGAGATTTCTAG 993 0.3938 MEEAKKNYTNYAIRCVYVVRIRTSKKDNNNNVNYLRLVCSREGKYVSSIKPEVKTLPSQTNQCPTGITIARKDDKWFIRTVVLDHSHDLCPKTSKLIPGNRKLSMQAKRTLEVNDDAGVRINKSFLSIMSDAGGFENMDFIERDARNYIGQYIRSLCKDGDGQALLRHFPSMKDFNNDFFYEIVLYEGNTICSVFWADARTRDACEEFGDVVSFNTTYLTNKYDMPFAPFVRVNHHVDRETKKRRPSSSRDGRRRQRNPTPSPPSSPPPPNNELFSSDEQYEKFANHFFNCEILESKYLEDAYFEGRNFQFYDILSEAGLTKFVSLNRDF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8562g00002 330 MobiDBLite consensus disorder prediction 238 276 - -
Vium8562g00002 330 MobiDBLite consensus disorder prediction 238 257 - -
Vium8562g00002 330 Pfam FAR1 DNA-binding domain 8 90 IPR004330 -
Vium8562g00002 330 PANTHER OS01G0519700 PROTEIN 2 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8562g00002 Vium-Chr8562 4280 6222 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vium8562g00002 FAR1 4.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8562g00002 - - vum:124847185 640.958