Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8557g00002 ATGTCAATGTTCGCGAGCATGCCCGAGGAGAATGTTCAGAAATCGTTCGAGGCGTTCTACGAGGAGTGGCTTGCGCGGCACGAAAATTTCCTTCAGCAGCTTCTGAGCGTCACGCCCAATGATAACGACGCAGAACAGAGGATGCTGATCGAGCAAGTTATGTGTCATTACCAGCAATTTTTGGAAGAGAAATCGAACGTGGCCAACGGCGACGTTTTCCTTCTCTTTTCCCCGCCCTGGCTTTCCGCCTACGAGAGGTCGCTGCTCTGGATTGGGGACTACAAGCCCTCGCTCATTCTCCGTCTCGCCAACGGCCATGTCACGGGCTTAACGGCGGAGCAGAGGGAGAAAATGGAGCGAGTCGGGGACGAGACCAAGCGAGCTGAGAGAGAGGTTTCCGAGGCTATGGCTTCCGTTCAAGAGAGCATGGCAAGTCCGCGCATGCTGGTGCTCGTCAGAGTGGTTGACGGCGAGAAAACGGAGCAGCAAGCGGCGGTTCAGGAACTCAAGGAAGCGCTTAAGAAGGTTTTCGAGAAAGGCGACGCGCTTCGCGCGTCGACGATGAGGAAGGTGGTGGAGATCTTAATCCCGCCGCAGACAGTGCAGTTACTGGCGGCGACGATGCGCTTTCAGATGCGCGTGAGGAAGAACGGTTTGCACCTAGACGAGGTTGGACCGTCACGTTGA 687 0.5604 MSMFASMPEENVQKSFEAFYEEWLARHENFLQQLLSVTPNDNDAEQRMLIEQVMCHYQQFLEEKSNVANGDVFLLFSPPWLSAYERSLLWIGDYKPSLILRLANGHVTGLTAEQREKMERVGDETKRAEREVSEAMASVQESMASPRMLVLVRVVDGEKTEQQAAVQELKEALKKVFEKGDALRASTMRKVVEILIPPQTVQLLAATMRFQMRVRKNGLHLDEVGPSR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8557g00002 228 Coils Coil 111 131 - -
Vium8557g00002 228 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 15 223 - -
Vium8557g00002 228 Coils Coil 159 179 - -
Vium8557g00002 228 Pfam Seed dormancy control 33 102 IPR025422 GO:0006351|GO:0043565
Vium8557g00002 228 ProSiteProfiles DOG1 domain profile. 13 224 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8557g00002 Vium-Chr8557 11132 11994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8557g00002 15 215 Calmodulin-binding Proteins AT1G77920 28.713 1.58e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8557g00002 - - vra:106760373 301.212