Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8557g00001 ATGGCGAATCAAGAAACTCAGCAGCGCCGTCCCCGTCAACAACGCCGGTCCAAGGATCGACCGGTGGTCCCGGCTAGGGTTCCGTTGAGGCTGTTGCTGCGGGTAGCGTCGGTTGCCGGAGGCATTCAGTTTGGGTGGGCATTGCAGCTCTCTCTTCTGACGCCGTACGTGCAGCAGCTGGGGATCCCGCACGTGTGGGCCAGCATCATATGGTTGTGTGGGCCGCTCTCTGGGCTGCTGGTGCAGCCCCTGGTGGGCCACTTGAGCGACCGCTGCACCAGCCGGTTCGGCCGCCGGAGACCGTTTATCTTGGGCGGAGCATTGGCGATCATCATTGCTGTTCTGATCATCGGTCACTCCGCGGACATCGGGTGGTGGTTCGGCGACACGCCCAAACATCGCCCCTGGGCTGTGGGCGTTTTCGTTTTCGGGTTTTGGATTTTGGACGTGGCTAACAACGTCACTCAGGGCCCTTGTAGAGCCTTGCTTGGTGATCTCACTGGTATATCTTTCTTCCCTATGAATTTCCAATCGTTAAGGACCAATTCAAAGCCCTAA 558 0.586 MANQETQQRRPRQQRRSKDRPVVPARVPLRLLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHVWASIIWLCGPLSGLLVQPLVGHLSDRCTSRFGRRRPFILGGALAIIIAVLIIGHSADIGWWFGDTPKHRPWAVGVFVFGFWILDVANNVTQGPCRALLGDLTGISFFPMNFQSLRTNSKP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8557g00001 185 MobiDBLite consensus disorder prediction 1 21 - -
Vium8557g00001 185 SUPERFAMILY MFS general substrate transporter 32 168 IPR036259 -
Vium8557g00001 185 PANTHER SUGAR TRANSPORTER 27 168 - -
Vium8557g00001 185 Pfam MFS/sugar transport protein 47 117 - -
Vium8557g00001 185 Gene3D MFS general substrate transporter like domains 30 174 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8557g00001 Vium-Chr8557 7594 9160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8557g00001 1 167 Sucrose Transporter Gene Family AT1G09960 67.778 2.27e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8557g00001 K15378 - gmx:100787939 276.944