Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8549g00003 ATGATTTTGCTTTCTCTTGTTTTTAAAGCTATATTTTTTATATCTGATATGATAATCTTTACTCAGGTGGAAGATAATGGTCTTAGCAGCTGTTCCTTTCCATTCATAGTTGCAGAGCAAGAAATTTGTTCAGAGATATGTAAGCTGGAGAATGTCATTGAGGCAGCCGAGACTGCTGATGACATCCAAATGAAAACTAAACTAATGGAAGAAAAGACCCAAGCATTGTATTTCGTACAAGAAATGGGTTGGCTCCTTCACAGAAACCGTGCGAAAGTTAGGCTGGGTCCTGTGGCACCTCTACAAGATTGCTTCCATTTTAATCGGTTCATGTGGCTTGTTGGCTTCTCTATGGACCATGACTGGTGTGCTGTGATGAAAAAGCTCTTGAACATTATCTTTGAAGGCACTGTGGATATAGGAGAGCATACATCAGTTGAGTTATCATTGTTAAAGATGGATCTTCTGCACAAAGCTGTAAAAAGAAATTGCAGGCCTATGGTGGAACTACTGCTAAAATTTGTGCCAGCTAATACTTCAGTTGGTGGAATCAGTAAAGAGAAGCAAGTCAACAAGTCCCCTAATAGATTCATATTCAGACCTGATTCTGTTGGGCCTTCTGGATTGACTCCCCTTCATGTTGCAGCAAGTATGCATGGTTCGGATAATGTATTGGATGCATTAACTGATGATCCAGGACTGGTGGGAATTGAGGCATGGAAAAGTGCTCAGGACACTACAGGTTTGACCCCTTATGATCATGCATCCCTGCGGGGCTACTACTCCTACATTCAACTTGTCCAGACGAAAATAAGCAACACATGCAAAAGTGAACATGTACTTAATATCCCTGGCACTCTTGTAGATAGTAACATAAGGCAGAAGCAATCAGATGGCCATAGGTCATCAAAAGTTTCAAGTTTGCAAACTGAGAAGATTGAAACAACAGCAATGGTGCGACATTGTGGGGTATGCCAGCACAAGTTGGCGTACGGTGGTATGAGAAGTGCACTGGTTTATAGGCCAGCAATGCTGTCAATGGTTGCCATTGCAGCTGTGTGTGTCTGCGTGGCTTTGCTCTTCAAAAGCTCACCCAAAGTCTATTTCGTATTCCAGCCATTCAGTTGGGAGTCATTGGAATATGGATCCATGTAA 1155 0.4208 MILLSLVFKAIFFISDMIIFTQVEDNGLSSCSFPFIVAEQEICSEICKLENVIEAAETADDIQMKTKLMEEKTQALYFVQEMGWLLHRNRAKVRLGPVAPLQDCFHFNRFMWLVGFSMDHDWCAVMKKLLNIIFEGTVDIGEHTSVELSLLKMDLLHKAVKRNCRPMVELLLKFVPANTSVGGISKEKQVNKSPNRFIFRPDSVGPSGLTPLHVAASMHGSDNVLDALTDDPGLVGIEAWKSAQDTTGLTPYDHASLRGYYSYIQLVQTKISNTCKSEHVLNIPGTLVDSNIRQKQSDGHRSSKVSSLQTEKIETTAMVRHCGVCQHKLAYGGMRSALVYRPAMLSMVAIAAVCVCVALLFKSSPKVYFVFQPFSWESLEYGSM 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8549g00003 384 SUPERFAMILY Ankyrin repeat 153 268 IPR036770 -
Vium8549g00003 384 Gene3D - 126 305 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8549g00003 Vium-Chr8549 19701 22318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8549g00003 5 383 SBP-box Gene Family AT2G47070 46.392 1.14e-107 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8549g00003 - - vum:124847169 768.459