Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8526g00007 ATGGCAGACGACGTCGTTCTGCTAGATTTCTGGCCGAGTCCTTTTGGGATGAGAGTGAGGGTTGCACTTGCTGAAAAAGGTATAAAGTATGAGCGCAAAGAAGAGGATCTGAAGAACAAGAGTTCTTTACTCCTACGAATGAATCCGGTTCACAAGAAAATTCCGGTTCTTATCCACAACGGCAAACCCATCTGTGAATCTCTCATTATTGTTCAATACATTGAAGATGTTTGGAATCACACAAATCCCTTGCTGCCTTCTGACCCTTACCAGAGAGCACAGGCAAGATTTTGGGCTGATTATGTTGACACTCAGATAGTTAATACCTTAGACAAGATTTCGAAAGGAAAAGGAGAAGAAAGAGAAGTTGCAAAGAAAGGGTTGATAGAAGCCCTTAAATTGTTGGAGGAAGAAGTGGGAGATAAAAGTTATTTTGGAGGAGAAAATCTTGGTTTTGTGGACATAGCACTTGTCTCATTCTACCCTTGGATAAAATCCTTTGCAAGTTTTGTCACTCTTAACATAGATGCTGAGTGTCCTAAGTTGATTGCTTGGGCCAAGAGGTGCCTTCAAAAAGAAAGTGTTGCTAAGTCTCTTCCTGGTGAGCAGGTGATCAATGAGTTCACAACAAAGATCTTCGGCATTGAGTAG 651 0.4147 MADDVVLLDFWPSPFGMRVRVALAEKGIKYERKEEDLKNKSSLLLRMNPVHKKIPVLIHNGKPICESLIIVQYIEDVWNHTNPLLPSDPYQRAQARFWADYVDTQIVNTLDKISKGKGEEREVAKKGLIEALKLLEEEVGDKSYFGGENLGFVDIALVSFYPWIKSFASFVTLNIDAECPKLIAWAKRCLQKESVAKSLPGEQVINEFTTKIFGIE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8526g00007 216 SFLD Main (cytGST) 2 211 - -
Vium8526g00007 216 FunFam Glutathione S-transferase U20 88 215 - -
Vium8526g00007 216 Gene3D Glutaredoxin 1 87 - -
Vium8526g00007 216 SFLD Main.3: Omega- and Tau-like 2 211 IPR045073 -
Vium8526g00007 216 CDD GST_N_Tau 5 78 - -
Vium8526g00007 216 Pfam Glutathione S-transferase, N-terminal domain 6 75 IPR004045 -
Vium8526g00007 216 SUPERFAMILY GST C-terminal domain-like 76 213 IPR036282 -
Vium8526g00007 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Vium8526g00007 216 FunFam Tau class glutathione S-transferase 1 87 - -
Vium8526g00007 216 Pfam Glutathione S-transferase, C-terminal domain 115 192 IPR004046 -
Vium8526g00007 216 Gene3D - 88 216 - -
Vium8526g00007 216 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Vium8526g00007 216 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Vium8526g00007 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vium8526g00007 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 200 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8526g00007 Vium-Chr8526 67204 68836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8526g00007 1 212 Glutathione S-transferase Gene Family AT1G78380 60.377 2.69e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8526g00007 K00799 - gmx:547520 340.887