Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8513g00004 ATGGCACTGGAAGTGCTTGAAGCGCTTGATTCAGCGCGAACACAATGGTACCATGTTACGGCCATCGTGATCGCAGGCATGGGGTTCTTCACCGACGCCTACGACCTTTTCTGTATCTCAACGGTTTCCAAACTTCTGGGACGCCTGTACTACTTCGATCCTAGCTCCGACAAGCCGGGAAAGCTCCCAACATCAGTAAACAACTTCGTCATTGGTGTCGCCATTGTCGGAACCCTCTCCGGCCAGCTAGTCTTCGGCTGGCTCGGCGATAAACTCGGCCGGAAAAAGGTCTACGGAATCACCCTCATCCTCATGGTTCTCTGCGCCATTGCCTCCGGTCTCTCATTCGGCGCCAGCGCGAAATCCGTGATGGGAACGCTGTGTTTCTTCCGCTTCTGGCTTGGCTTTGGTATCGGCGGCGACTACCCCCTCTCCGCCACTATCATGTCGGAGTACGCCAACAAGAGGACACGCGGGGCGTTTATAGCTGCAGTGTTCGCCATGCAGGGCGTGGGAATCATCTTCGCGGGGCTTGTCTCCATGACACTCTCCGCGCTTTTCCAATCCTATTACCATGCTCCGACGTATACTCAAAACCACGTCCTGTCCACGCCACCGGAGGCTGATTTTCTATGGCGGTTGGTTCTCATGATCGGTGCCATTCCGGCGCTGATGACTTACTACTGGCGAATGAAGATGCCAGAAACGGGGCGTTACACTGCCATCATAGAAGGTAACGCAAAACAAGCTGCGGCGGATATGGCGAGAGTTTTGGACATTGAAATCCAAGCAGAGCAAGATAAGATTGCCGAGTTCAACGCAGCGAATAACTACCCTTTGTGGTCGAACGAGTTCTTTAACCGTCATGGGCGTCATTTGATCGGAACCATGAGCTCATGGTTTCTTCTTGACATCGCTTTTTACAGCCAGAATCTAACCCAGAAGGATATTTTCCCTGCCATTGGACTCATAGACAAAGATTTTGAAATGAGCGCCATCGGTGAAGTGTTCCAGACGTCACGTGCCATGTTCGTGATCGCTCTGCTGGGGACCTTCCCCGGTTACTGGTTCACCGTTTTCTTCATCGAGAAGCTGGGGCGCTACAAGATCCAACTCGTGGGCTTCTTCATGATGTCGTTCTTCATGTTTGTGATCGGTGTGAAGTACGATTACCTCAAGAGCGAGAACAAGGGCCTCTTCGCTCTTCTCTACGGCTTGACGTTCTTCTTCGCAAACTTCGGACCCAACAGCACGACATTCGTACTTCCCGCGGAGCTGTTTCCAACGCGAGTGAGGAGCACGTGCCATGCGCTGAGTGCAGCGGCGGGGAAGGCCGGGGCACTGGTGGGGACGTTCGGAATACAGAGCTTGACGGTGGGTGGTGACTCGTACAAGATTAAGAAGGCGATGATTTTGCTGGCGGTGACTAACCTGTTAGGGTTCTTCTGCTCGTTCTTGGTTACTGAGACTAAGGGTAGATCGTTGGAGGAGATTTCCGGTGAGGATGGGAGAGAGAGTGAACTGACGGCAACGCCCAACGATTATAGGGTTCCGGTGTCAAGGACAGAGACCATGTGA 1578 0.5304 MALEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPSSDKPGKLPTSVNNFVIGVAIVGTLSGQLVFGWLGDKLGRKKVYGITLILMVLCAIASGLSFGASAKSVMGTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMTLSALFQSYYHAPTYTQNHVLSTPPEADFLWRLVLMIGAIPALMTYYWRMKMPETGRYTAIIEGNAKQAAADMARVLDIEIQAEQDKIAEFNAANNYPLWSNEFFNRHGRHLIGTMSSWFLLDIAFYSQNLTQKDIFPAIGLIDKDFEMSAIGEVFQTSRAMFVIALLGTFPGYWFTVFFIEKLGRYKIQLVGFFMMSFFMFVIGVKYDYLKSENKGLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGALVGTFGIQSLTVGGDSYKIKKAMILLAVTNLLGFFCSFLVTETKGRSLEEISGEDGRESELTATPNDYRVPVSRTETM 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8513g00004 525 Pfam Sugar (and other) transporter 22 499 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vium8513g00004 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 18 496 - -
Vium8513g00004 525 Gene3D MFS general substrate transporter like domains 17 514 IPR036259 -
Vium8513g00004 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 492 IPR020846 GO:0022857
Vium8513g00004 525 NCBIfam phosphate:H+ symporter 6 501 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vium8513g00004 525 CDD MFS_PhT 22 491 - -
Vium8513g00004 525 FunFam Inorganic phosphate transporter 1-6 17 512 - -
Vium8513g00004 525 SUPERFAMILY MFS general substrate transporter 8 499 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8513g00004 Vium-Chr8513 24350 25930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8513g00004 3 501 Inorganic Solute Cotransporters AT5G43350 62.963 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8513g00004 K08176 - gmx:100805284 936.021