Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8513g00001 ATGAGATGCTGTGCAAAACATCTATCTCATTTGCGAACTTTAGACAGGCAAAGGTTGACCTCAGCACCAATGGTTTTACTATACCAAAAGGATGGAAATATGGACCCTGAAACTTACATCAATCCAAAGGAATTCGATCTTTCCAGATGGGAAAATCACACAGCAAGAGCGGGTTCTTTTATTCCATTTGGATTGGGAAGCAGATTTTGTCCTGGGAGCGACCTGACCAAACTTCAGCTCACCATTTTCCTCCATCATTTTCTTCTTAACTACAGGACATATCATTAG 288 0.4097 MRCCAKHLSHLRTLDRQRLTSAPMVLLYQKDGNMDPETYINPKEFDLSRWENHTARAGSFIPFGLGSRFCPGSDLTKLQLTIFLHHFLLNYRTYH 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8513g00001 95 PRINTS E-class P450 group I signature 28 52 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8513g00001 95 PRINTS E-class P450 group I signature 60 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8513g00001 95 PRINTS E-class P450 group I signature 70 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8513g00001 95 PANTHER CYTOCHROME P450 26 24 91 - -
Vium8513g00001 95 Gene3D Cytochrome P450 7 95 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8513g00001 95 Pfam Cytochrome P450 33 92 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8513g00001 95 SUPERFAMILY Cytochrome P450 18 92 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8513g00001 95 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 63 72 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8513g00001 Vium-Chr8513 9365 11133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8513g00001 25 93 Cytochrome P450 AT2G32440 59.420 4.60e-26 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8513g00001 K04123 - var:108347198 197.593