Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium849g00003 ATGGGAGTGGCAGAGTTGAGAGGAATGAAGAGTCTCGGCTACAATGTTATCACCGGGCGTTGGTTCATGCTGTTTGCATCTTTACTTATCATGTCCGTTGCTGGGGCAACCTATATGTTTGGAGCATACTCTAATGAGGTCAAAACCTCTTTGGGGTACGACCAGTCCACTCTCAACTTGCTCAGCTTCTTCAAAGACCTAGGTGCCAACGTTGGAGTCGTATCCGGGTTGGTCAACGAGATAACACCACCCTGGGTGGTACTCTCTATAGGGGTTCTTATGAACTTCTTTGGCTATTTCATGATATGGCTTGCAGTCTCTGGCCGCATTGCCAAACCACAACTTTGGAAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACCTTTGCCAACACTGGTGCTTTGGTCACATGTGTCAAGAACTTCCCAGGAAGCCGTGGCAGTCTTTTAGGCCTACTCAAAGGTTACGTTGGTCTAAGTGGTGCCATCATCACACAGCTCTACCATGCCTTCTATGGTGATCACAACCCTCAGGCCCTTATCTTACTCATTGCGTGGCTCCCTGCCGCTGTTTCCTTCCTTTTCCTTCCAACAATTCGGATATTCAACACAGTCCACCAGCCTAAGAACAACAGAGTTTTCTACCACCTTCTTTATATTTCACTTTGTCTTGCAGGGTTTCTCATGGTTTTGATCCTTGTACAAAACAAGCTTAGTTTCTCAAGGATTGAGTACACAGTCGATGGCCTTGTTGTTCTCTCCTTTCTTCTTCTCCCACTCGCCGTGGTATTTAGAGAGGAGGTAAATCATTTAAAGGCCAAAACGGAAGGTTTGACCGATTCAGCACCTGAGTTGAAAGTAGTCACTGAAGTTATTCCACCTCCAAACGTCGAGCAAGAAGTACTACCAACCACCACAAGTTCACACGAGAAAAGTTCATGTTTCAGGAACATACTCAACCCCCCCAAGAGGGGAGAAGACTACACAATTTTGCAAGCACTTTTCAGTGTGGACATGCTGACTTTGTTCGTTGCAACAACGTTCGGTGCTGGCGGAACATTAACAGCCATAGACAATCTAGGACAGATTGGAAACTCATTGGGTTACCCAAGTAAAAGCACGACAACCTTTGTGTCCTTGGTGAGCATATGGAACTACTTAGGAAGAGTAGCTGCAGGTTATACCTCTGAAGTCCTCTTAGTCAAATACAAAGTTCCTCGTCCGTATATGGTCACTCTAGTTTTGCTTCTCTCTTGTGTTGGACATATTCTGATAGCCCTTGGCGTCCCAAACTCTCTCTACTTGTCTTCGGTGATTATTGGGTTTTGTTTTGGAGCTCAGTGGCCACTGATGTTTGCAATCATATCAGAAATATTTGGCCTTAAATACTACTCCACGTTATACAACTTAGGAGGCGCGGCAAGCCCTGTTGGATCGTACATTCTAAACGTGAAAGTGGCTGGTGTTTTGTATGATAAAGAGGCTTTGAAACAATTGAAGGCCAAAGGACTAACGAGAGAAGAAGGGAAGGACCTAACTTGTGTAGGAGTGCAATGCTACAGAATGGCTTTTATCATAATCACAGCTTCAACGTTGATTGCGTGTTTAGCCTCGTTCATCTTGGCGCTGAGGACTAGAAAATTTTACAAAGGGGATATCTATAGAAAGTTTAGAAGGGAACATGAAACAACAGAGAATGAGACGGAGATTACAAAGGAAGGTGTTAGATGTTCTGGTTGA 1746 0.4444 MGVAELRGMKSLGYNVITGRWFMLFASLLIMSVAGATYMFGAYSNEVKTSLGYDQSTLNLLSFFKDLGANVGVVSGLVNEITPPWVVLSIGVLMNFFGYFMIWLAVSGRIAKPQLWKMCLYICIGANSQTFANTGALVTCVKNFPGSRGSLLGLLKGYVGLSGAIITQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRIFNTVHQPKNNRVFYHLLYISLCLAGFLMVLILVQNKLSFSRIEYTVDGLVVLSFLLLPLAVVFREEVNHLKAKTEGLTDSAPELKVVTEVIPPPNVEQEVLPTTTSSHEKSSCFRNILNPPKRGEDYTILQALFSVDMLTLFVATTFGAGGTLTAIDNLGQIGNSLGYPSKSTTTFVSLVSIWNYLGRVAAGYTSEVLLVKYKVPRPYMVTLVLLLSCVGHILIALGVPNSLYLSSVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNLGGAASPVGSYILNVKVAGVLYDKEALKQLKAKGLTREEGKDLTCVGVQCYRMAFIIITASTLIACLASFILALRTRKFYKGDIYRKFRREHETTENETEITKEGVRCSG 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium849g00003 581 SUPERFAMILY MFS general substrate transporter 20 554 IPR036259 -
Vium849g00003 581 Gene3D MFS general substrate transporter like domains 332 551 IPR036259 -
Vium849g00003 581 Pfam Nodulin-like 20 266 IPR010658 -
Vium849g00003 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 21 557 - -
Vium849g00003 581 Pfam Major Facilitator Superfamily 362 547 IPR011701 GO:0022857|GO:0055085
Vium849g00003 581 FunFam Nodulin family protein 332 553 - -
Vium849g00003 581 CDD MFS_Mch1p_like 19 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium849g00003 Vium-Chr849 20300 22648 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium849g00003 9 562 Nodulin-like Gene Family AT2G39210 64.654 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium849g00003 - - gmx:100797779 962.214