Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium849g00002 ATGGGAGAAGAAATAAAGCAATTGAAAGCCAAAACTCAAGGTGTGACCGACTCAACCTCCCAGTTGAAAGTAGTCACTGAAATTATTCCACCTCCAAACGTGGAGCAAGAAGTACCGGCAACAACAGGTTCGCTCGAGAAAAGTTCTTGTTTCGGGAGCATACTCAACCCCCCAAAGAGGGGAGAAGACTACACCATTCTGCAAGCACTTTTCAGTATTGACATGCTGATTCTGTTCGCTGCAACAATATTTAGTGCTGGCGGAGCATTAACAGCCATAGACAATCTAGGACAGATTGGAAGGTCATTGGGATATCCGAGGAAGAGCATCACGACATGTGTGTCCTTGTTAAGCATATGGAACTATTTGGGACGGGTAGTTGCAGGTTTTGCCTCTGAGATATTGTTGATCAAATACAAAGCCCCTCGTCCCTTCATGCTCACTCTTGTTATGCTTCTCTCTTGTGTTGGCCATATTCTGATTGCCCTTGGCGCCCCAAATTCCCTCTACTTCGCTTCCGTGATTATAGGGTTCTGTTTGGGAGCACAGTGGCCGCTAATGTTTGCGATCATATCAGAAGTATTTGGCCTTAAACATTACTCCACGCTGTACAACTTTGGAGCCGTGGCAAGCCCTGTTGGATCTTACATTCTAAACGTGAGACTGACAGGTGTTTTGTATGATAAAGAGGCTTTAAAACAGTTGAAGGCCAAAGGACTCTCGAGACAAGCGGGGAAGGAGCTCAACTGCGTTGGAGTGCAGTGCTACAGAATGGCGTTTGTCATAATCACGGCGGCGACGCTGTTTGCCTGCTTTATTTCGTTTGTTTTGGTTCTGAGAACTAGAAAATTTTACAAAGGGGATATCTATAGAAACTTCAGAGTGGAACATGTAACCGAAGAGAATGAGATCACCGAAACTGGTATCAGAGTTCTGCTAGAAACTGAAGGACACGGAAGTGCATTAGGAGAACAGGATAAGAAAAACACAAAATGA 996 0.4478 MGEEIKQLKAKTQGVTDSTSQLKVVTEIIPPPNVEQEVPATTGSLEKSSCFGSILNPPKRGEDYTILQALFSIDMLILFAATIFSAGGALTAIDNLGQIGRSLGYPRKSITTCVSLLSIWNYLGRVVAGFASEILLIKYKAPRPFMLTLVMLLSCVGHILIALGAPNSLYFASVIIGFCLGAQWPLMFAIISEVFGLKHYSTLYNFGAVASPVGSYILNVRLTGVLYDKEALKQLKAKGLSRQAGKELNCVGVQCYRMAFVIITAATLFACFISFVLVLRTRKFYKGDIYRNFRVEHVTEENEITETGIRVLLETEGHGSALGEQDKKNTK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium849g00002 331 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 54 291 - -
Vium849g00002 331 Gene3D MFS general substrate transporter like domains 66 285 IPR036259 -
Vium849g00002 331 Pfam Major Facilitator Superfamily 81 281 IPR011701 GO:0022857|GO:0055085
Vium849g00002 331 SUPERFAMILY MFS general substrate transporter 57 284 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium849g00002 Vium-Chr849 4709 5751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium849g00002 4 294 Nodulin-like Gene Family AT2G39210 59.667 1.43e-126 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium849g00002 - - vum:124823824 650.973