Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8491g00009 ATGAATACGAAAATGCAGAAAGAAAAGCCGGAGCTGTTGCCTTCATCCGGAGACGATGACGACATCATTCTCAGTCAGCAACTCACACCGGATTACTTAACTCCAGAAGATCAGTTTCCTTTGAAAGGCTTCCATAGTAACATCGACAAGGTGGAGGAAGATAGCCCTTGCCCCAAGTCACCAGAGAAGCCGTATGCTACGAAAACCAAGAGATGCCGAATGGATGATGGTGATACTCTCAGATTTACCGATGATGAACCAGTTGTGGAACTTGGCAGTGACCATAATGATCCATTTGTGGGATTAGAGAATCATTTTTTTCGAGAAGAAGATTATTATAATAAGCTGAGGACTCGAAGACATGTGTCGAGTTCTGCAATTGCACTACGGTGCAGTACTCCTCTTTGTATTAGAAACTCCTTTTTGAAAAGCAATTCAGAGGAGGAAGAGGACATTTTTAGAAGCCAAACACTAAAATTTGATGACCTCATCCCTTCCATTATTGGTTGTAATGGTCGGTCACGCTATCTCTATGACTTTCGTTGGATTAAGAAAATTGGTAAGGGAAACTTAAACGAAGTTTTTAAAGTATTGAAGCGATTAGATGGCTGCATGTATGCTGTGAAATGTACCATCAAGCGGTTGCGTACGGAACCAGAAAGGCTTAAAGCTTTTAAAGAAGCTCAATCTTTGGCTGCCATAGGTTTCCATAAGAATATAGTGAGATATTATTCTTCGTGGATTGAGGATGAACAAATGTATACTCAAATGGAGTTTTGTGATCACAACTTATCTAGTGAAAATTGTACAACATTGCTTACCGAACGACATGAAATGGATGTTTTATATCAGGTTTCTAGTGCACTGCAATTTATACATGAAAAGGGAATAGCTCATCTTCATGTCAAGCCAGAAAATATTTACGTCAAAGATGGTATTTATAAGCTTGGTGGTTTTGGATGTGCGACTCTATTAGACAATAGCTTGCTTGTTGAAGAGGGTGATGCACGGTACATGCCGCTGGAGATTCTCAATAAGAATTATGATCACCTAGATAAGGCAGATATCTTCTCCCTAGGAGCTTCCATGTTTGACATAATTCGAAGGTCACATTTGCCAAAAGCAGAAACTGAGTTCTCTAAACTTAAAGAGGGAAAGGTGCCACACTTGCCTGGAGTTACAATCCAGTTTCAAAACTTGCTCCAGGTCATGATGGACCCTGATCCTCTTAAGCGTCCTTCCGCCACTGAGATATTGGGAAATTCAATATTCAGAGGGTCCCTTAAAATGACATAA 1296 0.4028 MNTKMQKEKPELLPSSGDDDDIILSQQLTPDYLTPEDQFPLKGFHSNIDKVEEDSPCPKSPEKPYATKTKRCRMDDGDTLRFTDDEPVVELGSDHNDPFVGLENHFFREEDYYNKLRTRRHVSSSAIALRCSTPLCIRNSFLKSNSEEEEDIFRSQTLKFDDLIPSIIGCNGRSRYLYDFRWIKKIGKGNLNEVFKVLKRLDGCMYAVKCTIKRLRTEPERLKAFKEAQSLAAIGFHKNIVRYYSSWIEDEQMYTQMEFCDHNLSSENCTTLLTERHEMDVLYQVSSALQFIHEKGIAHLHVKPENIYVKDGIYKLGGFGCATLLDNSLLVEEGDARYMPLEILNKNYDHLDKADIFSLGASMFDIIRRSHLPKAETEFSKLKEGKVPHLPGVTIQFQNLLQVMMDPDPLKRPSATEILGNSIFRGSLKMT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8491g00009 431 MobiDBLite consensus disorder prediction 45 66 - -
Vium8491g00009 431 Gene3D Phosphorylase Kinase; domain 1 169 259 - -
Vium8491g00009 431 FunFam Wee1-like protein kinase 259 428 - -
Vium8491g00009 431 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 80 422 - -
Vium8491g00009 431 MobiDBLite consensus disorder prediction 1 22 - -
Vium8491g00009 431 SUPERFAMILY Protein kinase-like (PK-like) 176 426 IPR011009 -
Vium8491g00009 431 Pfam Protein kinase domain 183 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium8491g00009 431 ProSiteProfiles Protein kinase domain profile. 180 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium8491g00009 431 Gene3D Transferase(Phosphotransferase) domain 1 260 427 - -
Vium8491g00009 431 MobiDBLite consensus disorder prediction 1 16 - -
Vium8491g00009 431 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8491g00009 Vium-Chr8491 67580 71283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8491g00009 19 424 Core Cell Cycle Gene Families AT1G02970 46.172 2.98e-124 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Vium8491g00009 Pkinase 4.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8491g00009 K06632 - gmx:100784055 488.034