Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8484g00003 ATGGAACAACACTGTCGTTGTGCTAGTTTTGGAAGCAACTTCAGTAAGGCAAAGCCTTATTTGTTAACGGTCGGACTTCAGTTTGGGTTCGCCGGAGCTCTCATCTTCTCCGTCGCCAGTCTCAACCATGGAATGAATCGTTACGTTTTCGTCGTCTATCGTAATGCCATCGCTGCTTTGGCCCTGGCTCCTTTTGCATTGATTTTTGAGAGGAAAATTAGGCCGAAGATAACACTCCCTGTCTTCTTGCAGATAATGGCACTCGGATTTGTGGAACCAGTGATTGACCAGGGCTTCACTTTCTTGGGAATGCAATACACATCAGCTTCGTTTACCTCTGCCATAATGAATGCCGTGCCTTCTGTGACTTTTGTGCTAGCCGTAATTCTAAGGTTAGAGCGTGTAAATGTTAAGGAAGTAAGGAGCCTAGCGAAGGTGATTGGGACATTGGTCACATTTTCAGGTGCTTTGCTAATGACACTTTACAAAGGTCCTGAATTTAACCTATTTCATTCTGCAAACGCAACCCAAAACCAAGACGGAACTCACTCTCCACAAGTTGTTAAACATTGGCTCTCAGGGACTCTTTTTCTTCTCCTGGGTTGTGTGGCTTGGTCATCTTTCTTCATTTTACAGTCCATAGCACTGAAAAGGTATCCAGCAGAATTGTCTCTCTCTTCTTTGGTGTGCTTATCTGGTGCCGTGCAAGCTAGTGTGGTGGCAATTATTGCCACTCGTCATTCTGGGCTTGCGGCATGGGCCTTGGGCTGGGACTTCAGACTCTACGGCCCTCTCTACACGGGAATTGTTACCTCTGGAATAACGTATTATCGCAAGGGTTGGTGTTGCAAAGCAGGGGCCCCGGTATTTTTAACTGTCCTTTAA 885 0.461 MEQHCRCASFGSNFSKAKPYLLTVGLQFGFAGALIFSVASLNHGMNRYVFVVYRNAIAALALAPFALIFERKIRPKITLPVFLQIMALGFVEPVIDQGFTFLGMQYTSASFTSAIMNAVPSVTFVLAVILRLERVNVKEVRSLAKVIGTLVTFSGALLMTLYKGPEFNLFHSANATQNQDGTHSPQVVKHWLSGTLFLLLGCVAWSSFFILQSIALKRYPAELSLSSLVCLSGAVQASVVAIIATRHSGLAAWALGWDFRLYGPLYTGIVTSGITYYRKGWCCKAGAPVFLTVL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8484g00003 294 PANTHER WAT1-RELATED PROTEIN 18 293 IPR030184 GO:0016020|GO:0022857
Vium8484g00003 294 Pfam EamA-like transporter family 19 160 IPR000620 GO:0016020
Vium8484g00003 294 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8484g00003 Vium-Chr8484 36683 39707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8484g00003 12 267 Nodulin-like Gene Family AT4G08290 59.922 3.86e-109 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8484g00003 - - vum:124847038 577.015