Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium846g00037 ATGTCAGACCCGAAGACCCGGACCCGAGCTTACGATCCCTACAAGGATCTCGATGCTCCAATTCGAAACCTCTACCACCTCCCAACCTCGCCGGAGTTCCTCTTCGTTGAAGAGGCCCGCCGCAAGCGCCGCTCATGGGGCGAGAACCTCACCTTCTACACCTGATGCGGCTACCTGGCCGGAGCCCTCGGCGGCGCCGGCTCAGGACTCCTAGACGGTGTCAGGGCCTTCGAGTCCGGCGACACAACGAAGGTCCGAATCAACCGCGTCCTGAACGCGGCGGGACACTCGGGTCGGGTCTGGGGAAACCGGGTCGGGATACTAGGGTTACTCTACGCCGGAATCGAAAGCGGAATCGAGGCGGCGAGAGACGCCGACGACGTATGGAATAGCGTCGCAGCGGGGCTCGGCACCGGCGCACTGTACCGGGCGGCGAGAGGGGTGAGATCAGCGGCGGTAGCCGGAGCGGTGGGCGGCGCTGTCGTGGGAGTGGCCGTGGCGGGGAAGCAAGCGTTGAAACGATATGTGCCTATATGA 537 0.6425 MSDPKTRTRAYDPYKDLDAPIRNLYHLPTSPEFLFVEEARRKRRSWGENLTFYTXCGYLAGALGGAGSGLLDGVRAFESGDTTKVRINRVLNAAGHSGRVWGNRVGILGLLYAGIESGIEAARDADDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGAVVGVAVAGKQALKRYVPI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium846g00037 178 Pfam Tim17/Tim22/Tim23/Pmp24 family 53 161 - -
Vium846g00037 178 PANTHER TIM23 20 166 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium846g00037 Vium-Chr846 289664 290638 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium846g00037 8 174 Chloroplast and Mitochondria Gene Families AT1G17530 65.680 3.53e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium846g00037 K17794 - gmx:100813158 261.922