Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8437g00004 ATGGAGAAGGTGGTGTGTGTCACCGGCGGCAGCGGCGCCATCGGTTCATGGCTCGTTCACCTCCTTCTGAACCGCGGCTACACTGTCCACGCCACCGTCCAAAATCTCAACGATGAGGCCGAGACGAAGCATCTAGAAGCCTTGGATGGAGCGCCGGCGCGCCTCCGCCTCTTCCAGATGGAGCTCCTCCACTACGATTCTGTCCTCGCCGCAGTGTGCGGCTGCGCCGGCGTGTTCCACGTCGCCTCTCCTTGCACTGTTGAACAAGTCCAGGACCCTCAGAAGGAGCTTCTGGACCCGGCCATAAAGGGCACCTTGAACGTGCTAACGGCAGCGAAAGAAGCAGGGGTACGTCGCGTGGTGGTCACGTCCTCCACCTCCGCGATTGTTCCGAGCCCTAATTGGCCCGGTGACGTTCCCAAGAGGGAGAACTGCTGGACTGACGTCGAATTTTGCAAGCAAAAGGGGTTGTGGTATCCATTGTCGAAGACTTTGGCCGAGAAGGCAGCTTGGGATTTTGCAAAGGAGACTGGGTTAGATGTTGTTGTAGTGAATCCTGGCAATGTGGTGGGTCCTGTGATTGCACCGAGGCTTAATGGAAGCATGGTCATGTTTGTGCGCCTACTTCAAGGTTGTGATGATACATATGAAAACTTTTTTATGGGATCGGTCCACTTTAAGGATGTAGCATTGGCACATATTTTGGTGTATGAGAATAAATCTGCAGTTGGTAGGCATGTGTGTGTTGAAGCTATCTCTCACTATGGTGATTTTGTGGCCAAAGTTGCTGAACTTTATCCAGAGTACAATGTGCCTAAGATGCAACGAGATACCCAACCAGGATTATTGAGAGTGAAGGATGGATCAAAGAAACTTATGGATTTGGGTATGCAATTCATTCCTATGGAGAAGATTGTAAAGGATGCTGTAGAGGACTTGAAGAGAAAAGGGTTCATTTCATAA 963 0.5088 MEKVVCVTGGSGAIGSWLVHLLLNRGYTVHATVQNLNDEAETKHLEALDGAPARLRLFQMELLHYDSVLAAVCGCAGVFHVASPCTVEQVQDPQKELLDPAIKGTLNVLTAAKEAGVRRVVVTSSTSAIVPSPNWPGDVPKRENCWTDVEFCKQKGLWYPLSKTLAEKAAWDFAKETGLDVVVVNPGNVVGPVIAPRLNGSMVMFVRLLQGCDDTYENFFMGSVHFKDVALAHILVYENKSAVGRHVCVEAISHYGDFVAKVAELYPEYNVPKMQRDTQPGLLRVKDGSKKLMDLGMQFIPMEKIVKDAVEDLKRKGFIS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8437g00004 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 310 - -
Vium8437g00004 320 Pfam NAD dependent epimerase/dehydratase family 5 239 IPR001509 -
Vium8437g00004 320 FunFam Cinnamoyl-CoA reductase 1 1 320 - -
Vium8437g00004 320 Gene3D - 1 320 - -
Vium8437g00004 320 CDD FR_SDR_e 5 296 - -
Vium8437g00004 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 313 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8437g00004 Vium-Chr8437 35581 37895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8437g00004 3 320 Monolignol Biosynthesis Gene Families AT5G58490 74.528 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8437g00004 - - gmx:100803241 557.37