Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8397g00007 ATGGAGAATAATAACAACGCTGGTGACACGCTGCATCCACCCGGTGCTAAACATGACGGTGCCGCCGCCCAAGCCAACCCGTTGTCCCCGACGCGGCATGGTCAGGCGGAGGAGGAGCATAAGAAAGAAGAAGCCGCCGCGTCTACTCCGACAAGCCTCGAGAAACTTGCTCAAGAGATTGACCAATTCGCGAGGAGACTAAAAACCGATGGAAATGCGCACAACTTTGAGATTCCTGAATTCACTGAGAGATACTTGGATCTCGTGGAAGAGAAGATAATGAAATACGACGCGGGTGAAGGTAAACCGAGATGGGGTGAGGTGTCGGATGAAGATTCGTGGTTGTTGAACAATGCGAATAGGTTTTCAAAACTGATGACATTGGTGACTGGTAATTATCCTGATCATGAACCGGAGAAGATCAGCGGTGCACAAGTCTCGATGATGAACCGCATTTCCTCAATCCACCAGCGTTTGATGACGTATTTGGAGGAGGACTTCCGGTTTCTGATGGAAGAATCAAGAATCCCAACCGAATTGGATCCCGGAGGATATAATCAGAACAGCATCGATACCAAAGGAAAACAACACATGGCGGCATTTGAACAACAACAAGAGGTGGCGCAAGAACAAGATGGTTTGGAACAAGACACGAATTTCCCGGGGTACTCCGAGGAGACAATTACCAGCCTAAGTAAGATCGCCAGCGAGATGTTATTCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTACATCATCTCGCGGAGGAACGCCTTCGAGGAGATTAACCAGAAGTTAGCGTTAGAGAAAATCAGCATCGACGAGATGGTGACGAAGGTGCAGTGGGAGACTATGGCCAGGGACATGATCCCTGCCTGGATCAACACGCTCAAGCAGTACGGGGGAGTGTACTTCCCCGGCGAGCGAAAGCTGACCGAGGCTGTGTTCGCAAACAACCAGGCCGTGGCGGCGGGACTCTTCAGCAGCCTCTCCCGCGGCGTTGTGATTCAGCTTCTCAACTTCGCGGAGGGCGCCGCCATGACGAAGCGAGCCGGAGAGAAGCTCTTCAAGCTCCTGGACATGTACGAGAGTCTCTGCCAGGTGATCCCCTGCGTGGCCAGACTCTTTCCAGAAGAGTCCATTGAGGAGATAAAGACAGAGATGAACCTTGCCAAGTCCAGACTTGGGGAGGCATCCATCCACATCTTCTGCGACCTGGAGAACCAGATTAAATCGGAGACAGCGAAAAACGCCGTCCCCGGTGGCGCAGTGCACCCCCTCACACGCTACATCATGAACTATCTAAACATAGCAGGGGACTACAAGGAAACCCTTGAGCAGGTTTTCAGGGAGCACACGACGAGGGACCGTTCGGGTTCCACAAGCAAGCATGCGGAGCAGAAGAATGAGGGATCTTGGGACAACGAAACACCATCTCCATTCGCAAAACAGACGTTGAGGGTGATGGACCTGCTAGACTCGAGCCTGGAGGGGAAGGCGCGTCTGTACAAAGAGGTGGCGCTTAGCAACTTCTTCATGATGAACAATGGGAGGTACATTCTGCAGAAGATAAAGAGTTCTAAGGAGATGAGCAAGGTGATGGGAGACAACTGGATCAGGAAGAAGTCCTCGGAGCTGAGAAACTACCACAAGAACTACCAGAGGGAGACGTGGAACAGGGTGCTGCAGTGTCTGAACCACGAAGGGTTGACCGTGAACGGGAAGGTTCACAAGCCGGTGCTGAAGGAAAGGTTCAAGAGCTTCAACTCTTTGTTTGACGAGATTCACAAGACGCAGAGCTCGTGGGTAGTGAAGGACGAGCAGCTGCAGTCGGAGCTGAGGGTTTCCATCTCTGCAGTGATTATCCCTGCTTACCGATCATTCGTTGCGAGGTTCGCCCAGACTTTTGACCCGGGGAGACAGACAGAGAAGTATATAAAGTACCAAGCTGAAGACATTGAGACTTACATTGATGAGTTGTTTGAAGGGAAGCCTCACCAGTCAATCGGAAAAAGGAGAACATAA 2025 0.5165 MENNNNAGDTLHPPGAKHDGAAAQANPLSPTRHGQAEEEHKKEEAAASTPTSLEKLAQEIDQFARRLKTDGNAHNFEIPEFTERYLDLVEEKIMKYDAGEGKPRWGEVSDEDSWLLNNANRFSKLMTLVTGNYPDHEPEKISGAQVSMMNRISSIHQRLMTYLEEDFRFLMEESRIPTELDPGGYNQNSIDTKGKQHMAAFEQQQEVAQEQDGLEQDTNFPGYSEETITSLSKIASEMLFGGYESECCQVYIISRRNAFEEINQKLALEKISIDEMVTKVQWETMARDMIPAWINTLKQYGGVYFPGERKLTEAVFANNQAVAAGLFSSLSRGVVIQLLNFAEGAAMTKRAGEKLFKLLDMYESLCQVIPCVARLFPEESIEEIKTEMNLAKSRLGEASIHIFCDLENQIKSETAKNAVPGGAVHPLTRYIMNYLNIAGDYKETLEQVFREHTTRDRSGSTSKHAEQKNEGSWDNETPSPFAKQTLRVMDLLDSSLEGKARLYKEVALSNFFMMNNGRYILQKIKSSKEMSKVMGDNWIRKKSSELRNYHKNYQRETWNRVLQCLNHEGLTVNGKVHKPVLKERFKSFNSLFDEIHKTQSSWVVKDEQLQSELRVSISAVIIPAYRSFVARFAQTFDPGRQTEKYIKYQAEDIETYIDELFEGKPHQSIGKRRT 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8397g00007 674 MobiDBLite consensus disorder prediction 33 48 - -
Vium8397g00007 674 MobiDBLite consensus disorder prediction 1 53 - -
Vium8397g00007 674 SUPERFAMILY Cullin repeat-like 144 662 IPR016159 -
Vium8397g00007 674 PANTHER EXOCYST COMPLEX PROTEIN EXO70 83 663 IPR004140 GO:0000145|GO:0006887
Vium8397g00007 674 MobiDBLite consensus disorder prediction 451 471 - -
Vium8397g00007 674 MobiDBLite consensus disorder prediction 451 480 - -
Vium8397g00007 674 Pfam Exo70 exocyst complex subunit 292 659 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium8397g00007 674 Gene3D Exocyst complex component Exo70 111 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8397g00007 Vium-Chr8397 97129 99902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8397g00007 44 674 EXO70 exocyst subunit family AT5G13990 48.006 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8397g00007 K07195 - gmx:100820172 919.457