Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8352g00002 ATGGCGCTATCCAAAGGCTCTGAAACGGCAAAACCCAAACCGGTTATACCATGGAAGGCGCGCATTTCAATAACCTTTATTTCTACGATTACCGACGCTGCGCGTCGCTCTAACGGCACCATTAATCGCCGTCTAACGAACCTTCTCGATCTCAAGGCACACGCCAGCTCCTCACCCGTTAATGGTGTTACCTCTAAAGATGTCACCATTGACGCCGAAAACAAACTCTGGTTCCGAGTATTCGCCCCCGCAGTCTCCCCCGCCGCCGGCACCCTCCCCGTCGTCGTCTACTTCCATGGGGGTGGCTTCGCGTTCCTCTCGCCGGACTCCCTCGGCTACGACGCCGTCTGTCGCCGAATATGCCGCCACGTCCCCGCCGTCGTTGTTTCTGTCAACTACCGCCTCACACCGGAGCACCGGTACCCGTCACAGTACGACGACGGTGAGCTCTTCCTCCACTTCCTCGACGAGAATCGCATGGTACTGCCGGAAAACGCTGATGTGTCAAAATGTTTCCTTGCCGGCGACAGCGCCGGGGCTAACTTAGCTCACAACGTCGCAGTTCGGGTCGGGAAGATGGGAATCCGGGAAAACGAGGTTGGGAATTCAGGGCTTCGGAGAATCCNACGGCAAGACGACGCGGCTAGAAAACCAGACTTTTCGTCTGTGTTTATTCGCTGGCGTTTTTCTTCAAGAAGCTCGATGCACAACCATTGA 717 0.5593 MALSKGSETAKPKPVIPWKARISITFISTITDAARRSNGTINRRLTNLLDLKAHASSSPVNGVTSKDVTIDAENKLWFRVFAPAVSPAAGTLPVVVYFHGGGFAFLSPDSLGYDAVCRRICRHVPAVVVSVNYRLTPEHRYPSQYDDGELFLHFLDENRMVLPENADVSKCFLAGDSAGANLAHNVAVRVGKMGIRENEVGNSGLRRIXRQDDAARKPDFSSVFIRWRFSSRSSMHNH 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8352g00002 238 PANTHER ARYLACETAMIDE DEACETYLASE 43 201 - -
Vium8352g00002 238 Gene3D alpha/beta hydrolase 4 210 IPR029058 -
Vium8352g00002 238 Pfam alpha/beta hydrolase fold 95 193 IPR013094 GO:0016787
Vium8352g00002 238 SUPERFAMILY alpha/beta-Hydrolases 43 190 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8352g00002 Vium-Chr8352 19080 19889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8352g00002 1 195 Carbohydrate Esterase AT3G05120 39.234 3.50e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8352g00002 - - gmx:102665243 303.138