Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8352g00001 ATGGCGCTATCCAAAGGCTCTGAAACGGCAAAACCCAAACCGGTTATACCATGGAAGGCGCGCATTTCAATAACCTTTATTTCTACGATTACCGACGCTGCGCGTCGCTCTAACGGCACCATTAATCGCCGTCTAACGAACCTTCTCGATCTCAAGGCACACGCCAGCTCCTCACCCGTTAATGGTGTTACCTCTAAAGATGTCACCATTGACGCCGAAAACAAACTCTGGTTCCGAGTATTCGCCCCCGCAGTCTCCCCCGCCGCCGGCACCCTCCCCGTCGTCGTCTACTTCCATGGGGGTGGCTTCGCGTTCCTCTCGCCGGACTCCCTCGGCTACGACGCCGTCTGTCGCCGAATATGCCGCCACGTCCCCGCCGTCGTTGTTTCTGTCAACTACCGCCTCACACCGGAGCACCGGTACCCGTCACAGTACGACGACGGTGAGCTCTTCCTCCACTTCCTCGACGAGAATCGCATGGTACTGCCGGAAAACGCTGATGTGTCAAAATGTTTCCTTGCCGGCGACAGCGCCGGGGCTAACTTAGCTCACAACGTCGCAGTTCGGGTCGGGAAGATGGGAATCCGGGAAAACGAGGTTGGGAATTCAGGGCTTCGGAGAATCCGGATCGTCGGGTTGGTGGCGATCCAACCTTTTTTCGGTGGGGAGGAGCGGACGGAGGCTGAGGTGAGGTTTGAAGGTGCGCCGCTGGTGTCAAAGGAGAGGACCGATTGGACGTGGAAGGCGTTTTTGCCTGACGGGTCGGATCGTGACCACAGAGCATGCAACGTGAGTGGGCCGAATTCGGAGGATTTGTCGGGTTTGGATTACCCGGATACCGTTGTTGTTGTGGGTGGGTTTGATCCTTTACAAGATTGGCAAAGGAGGTTTTACGAGTGGTTAACAAAATCGGGTAAAAAGGCCCAATTGGTTGAGTATCCAAAGATGTTTCATGCTTTTTATATATTTCCTGATTTGCCCGAGTCTTCTCAAATGATCACACAAATAAAGGATTTCATGAATAAGAAACTCGCTGAATAG 1041 0.537 MALSKGSETAKPKPVIPWKARISITFISTITDAARRSNGTINRRLTNLLDLKAHASSSPVNGVTSKDVTIDAENKLWFRVFAPAVSPAAGTLPVVVYFHGGGFAFLSPDSLGYDAVCRRICRHVPAVVVSVNYRLTPEHRYPSQYDDGELFLHFLDENRMVLPENADVSKCFLAGDSAGANLAHNVAVRVGKMGIRENEVGNSGLRRIRIVGLVAIQPFFGGEERTEAEVRFEGAPLVSKERTDWTWKAFLPDGSDRDHRACNVSGPNSEDLSGLDYPDTVVVVGGFDPLQDWQRRFYEWLTKSGKKAQLVEYPKMFHAFYIFPDLPESSQMITQIKDFMNKKLAE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8352g00001 346 Pfam alpha/beta hydrolase fold 95 321 IPR013094 GO:0016787
Vium8352g00001 346 SUPERFAMILY alpha/beta-Hydrolases 50 343 IPR029058 -
Vium8352g00001 346 Gene3D alpha/beta hydrolase 4 345 IPR029058 -
Vium8352g00001 346 PANTHER ARYLACETAMIDE DEACETYLASE 43 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8352g00001 Vium-Chr8352 7289 8448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8352g00001 1 343 Carbohydrate Esterase AT3G05120 37.255 1.81e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8352g00001 - - gmx:102665243 536.569