Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium834g00007 ATGCAGAGCATAGTTCTTTCTTTCTCCCCTTTGCTCTCTCTCCGCAAACTTCACACCTCTCTCTCTCCTTCCACTGCCAAACCCAACCGCATTCTCACTTTCTCTTCCTCTTCATTCCCATGTCAACGGTCTTCTCCTTCTTCTTTCAAACTTGCTCCCTCTCCTCCCTTGCTCCATGCCGGACCAACCTCCGTGCCGGAGGGCAGTGCCGCCGAGTTCTCTGGGGGCAACAGGCTGCTCAACATTCTTGAATTGGGTTCCCTGTTTGCGTTCTGGATCCTATTCAACATCTACTTCAACATCTATAACAAACAGGTCTTAAAAGTTTACCATTTCCCTTTAACCGTTAGCACGATTCAGTTTGCCATGGGGACTCTCCTCGTAGCGTTCATGTGGGGTTTTAATCTCTACAAGAGGCCAAGACTCAGTGGCGCGCAGCTTGCAGCGATATGGCCACTGGCTCTGGTTCATACTTTAGGGAATCTTTTTACTAACGTGAGTCTTGGGATGGTTGCTGTGTCTTTTACTCACACAATAAAAGCTATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTTCTTGGAGAGAATCCTACTGCATGGGTGGTTGGTTCCCTTGTGCCTGTTGTTGGTGGGGTAGCGCTAGCATCTGCTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAGCTTATGGTTAACACGGAGGAATCTATGGACAACATAACTCTCTTCTCAATAATAACAGTTATGTCCTTCTTGATATCAGCACCTCTAACTTTGTTAATAGAGGGTGTTAAATTTACCCCTACTTACCTGCAATCTTCTGGATTAAATGTTAACGAAGTGTGCATCAGATCTCTTCTTGCTGCGCTATGTTACCATGCCTATCAGCAAGTTGCGTATATGATACTGCAGAATGTGTCACCTGTTACCCTCTCTGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCAGTCATCTTCTTCCGAACTCCAGTATCACCAATTAACGCACTTGGCACTGCTATAGCTCTTGCTGGCGTTTTCCTGTATTCCAGGGCGAGGCGACTAAAGTCAAAGACCATTTAG 1152 0.4575 MQSIVLSFSPLLSLRKLHTSLSPSTAKPNRILTFSSSSFPCQRSSPSSFKLAPSPPLLHAGPTSVPEGSAAEFSGGNRLLNILELGSLFAFWILFNIYFNIYNKQVLKVYHFPLTVSTIQFAMGTLLVAFMWGFNLYKRPRLSGAQLAAIWPLALVHTLGNLFTNVSLGMVAVSFTHTIKAMEPFFSVLLSAMFLGENPTAWVVGSLVPVVGGVALASATEASFNWAGFWSAMASNLTNQSRNVLSKKLMVNTEESMDNITLFSIITVMSFLISAPLTLLIEGVKFTPTYLQSSGLNVNEVCIRSLLAALCYHAYQQVAYMILQNVSPVTLSVGNCVKRVVVIVSSVIFFRTPVSPINALGTAIALAGVFLYSRARRLKSKTI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium834g00007 383 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 83 381 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vium834g00007 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 302 377 - -
Vium834g00007 383 Pfam Triose-phosphate Transporter family 84 373 IPR004853 -
Vium834g00007 383 PANTHER SOLUTE CARRIER FAMILY 35 84 376 - -
Vium834g00007 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 129 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium834g00007 Vium-Chr834 55252 58223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium834g00007 63 381 Antiporters AT5G33320 72.414 9.88e-162 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium834g00007 K15283 - gmx:100780925 558.525