Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8295g00004 ATGACTATGGCAGAGGGGGTGGTTCTGCTAGATTCGTGGGCAAGTCCATTTGGGATGAGGGTGAGGATTGCACTTGCTGAAAAGGGTATAAATTATGAGTACAAAGAAGAGGACTTGTGGAACAAGAGCCCTCTCTTCCTTCAAATGAACCCGGTTCACAGGAAAGTTCCGGTTCTCATTCACAAGGGAAAGCCCATTTGCGAATCTCTCATTGTTGTTCAGTACATTGATGAGGTCTGGTTTGACACAAATCCCTTGTTACCTTCTGACCCTTACCAGAGAGCAGAGGCTAGATTCTGGGCTGACTATGTTGACAAGAAGATATATGATGCTGGAAGGAAGATTGTTTCGACATCAAAAGCAGAAGAAAGAGAAGTTGGCAAGAAGGAGTTGATAGAAGCCCTTAAAGTGTTGGAGGAACAGCTGGGAGAAAAGAGTTATTTTGGCGGGGACGATCTTGGTTTTTTGGATATAGCAGTTGTCCCATTCTACACTTGGTTCAAATCGTATGAAACTTTTGGCAGCTTTAGCGTTGAGAGTGAGTGCCCCAAGCTTATTGCTTGGGCCAAGAGGTGCCTCCAGAAAGAGAGTGTTTCCAAGTCTCTTCCTGATCAGCATACGGTCAATGAGTTCGTTGTGGAGAGGAGAAAGAAATTAGGCATTGAGTAG 669 0.4484 MTMAEGVVLLDSWASPFGMRVRIALAEKGINYEYKEEDLWNKSPLFLQMNPVHRKVPVLIHKGKPICESLIVVQYIDEVWFDTNPLLPSDPYQRAEARFWADYVDKKIYDAGRKIVSTSKAEEREVGKKELIEALKVLEEQLGEKSYFGGDDLGFLDIAVVPFYTWFKSYETFGSFSVESECPKLIAWAKRCLQKESVSKSLPDQHTVNEFVVERRKKLGIE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8295g00004 222 Coils Coil 121 141 - -
Vium8295g00004 222 SFLD Glutathione Transferase (cytosolic) 4 220 IPR040079 -
Vium8295g00004 222 FunFam Glutathione S-transferase U20 90 222 - -
Vium8295g00004 222 FunFam Tau class glutathione S-transferase 1 89 - -
Vium8295g00004 222 Pfam Glutathione S-transferase, N-terminal domain 9 78 IPR004045 -
Vium8295g00004 222 Pfam Glutathione S-transferase, C-terminal domain 127 191 - -
Vium8295g00004 222 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Vium8295g00004 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 208 IPR045073 -
Vium8295g00004 222 Gene3D Glutaredoxin 3 89 - -
Vium8295g00004 222 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Vium8295g00004 222 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Vium8295g00004 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 219 IPR010987 -
Vium8295g00004 222 SFLD Main.3: Omega- and Tau-like 4 220 IPR045073 -
Vium8295g00004 222 CDD GST_N_Tau 7 80 - -
Vium8295g00004 222 Gene3D - 90 222 - -
Vium8295g00004 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8295g00004 Vium-Chr8295 35322 36367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8295g00004 3 219 Glutathione S-transferase Gene Family AT1G78380 66.820 1.17e-108 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8295g00004 K00799 - gmx:547520 369.007