Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium8274g00009 | ATGCAAGACATTTTCGGATCAGTTCGCAGATCACTGGTATTCCGCGGTTCGCCGGAGAGCGATGAGACCTCGCTCGGAGTCGGAGGAAGCCTCGTCGATAAGATCAGTTATTGTATACGAACTTCCAGAGTCTTCTCCAAACCCTCGCCGCCGTCGCCTTCGCCGTCTATTCCTGAGGACGCTGCGCCTCCGATCCGATGGCGGAAAGGCGAGTTGATCGGTTGCGGTGCCTTTGGCCAAGTCTACGTTGGAATGAATATCGATTCCGGAGAGCTTCTGGCGGTTAAACAGGTTTTGATTGCGGCGAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCACATAAAAGAGCTAGAAGAAGAAGTTAAATTACTTAAAGACCTTTCTCATCCAAACATTGTTAGATATTTGGGTACGGTCAGAGAAGAGGACACCCTAAATATTCTCTTGGAGTTTGTTCCAGGTGGATCCATATCATCGCTGTTGGGGAAGTTTGGGGCTTTCCCTGAGGCTGTAATAAGAACCTACACGAAGCAGCTACTACTTGGACTTGAATACTTGCACAAAAATGGAATCATGCACAGAGACATTAAGGGGGCCAATATTCTGGTAGATAATAAAGGGTGCATAAAACTTGCAGACTTTGGGGCATCCAAACAGGTCGTTGAGCTGGCAACCATTTCCGGGGCCAAGTCCATGAAGGGTACTCCATATTGGATGGCTCCAGAAGTTATTCTCCAGACTGGGCATAGCTTCTCTGCTGACATATGGAGTGTGGGTTGTACCGTGATTGAGATGGCCACTGGAAAGCCTCCCTGGAGTCAGCAATACCAACAAGAGGTTGCTGTTCTCTTCCATATAGGGACAACTAAGTCTCATCCACCAATCCCTGATCATCTTTCTGCTGCAGCAAAAGATTTTCTGCTAAAATGTTTGCAGAAGGAACCGGTCTTGAGGTCATCGGCATCAGAACTGCTGCAGCATCCCTTTGTAACTGGTGAACATATGACTTCTCTTACTTTGTCATCTAATGTCACGGAAAATTTTATAGCTTCATCACCATCATGTACCCCAAATGATGAATCCATCCTTTGCTCTTCAACAGTAAATCCTCTGGACTCGGGAAATAAACAATTGTGGGGAATGAGCAATGATGATGATGATATGTGTGTAATTGACGACAAAGAAGAGTTCTCGCATAATGATGTTAAATACAAATCACTGATGTCAACTGATATTGAGAGTTTCAACCCAATGTCTGATCCCTCTGATGATTGGGGGTGTAAATTTGATGCAAGTTCAGAACTGGAAAATCGAGAGGTCAATTTTGTCACAGATGAAAATTACATGCCACCTGATCAGTCAGGGGATGATAAGGGGCAGCCAGATTTTTCCTTTCCAGGTGTCCCATCTCTTTCAGAGGAAGATGATGAACTCACAGAGTCAAAAATCAAAGCCTTTTTGGATGAGAAGGCTCTTGAACTGAAAAAGCTACAGACACCTTTATATGAAGAGTTTTACAACAGTTTAAATACATCCTGTTCTCCCAATGTTGACAGGACAAGTGATGATACTGCTTCTCGAAATTTTTTGAAATTACCTCCTAAAAGCAGGTCACCTAATCGAGTACCAATCAGCACACCATCTAAAGCCATCGATAATACTGGAAGTCCTGGAAGTAATGGCCAGTCCTCATCTACTGTTGGCCATGTAAATAACCATACATCTCAGGATATTCCAGCATCTCCCCTTAATGAATGGAAAGGAGTGATAGTTGACTCTCAGCAGCAGCCTAGTAGCCCAAGTCTAAGCTTTTCTGAGAGACAGAGGAAATGGAAAGAAGAGCTTGACCAGGAGCTTGAGAGAAAGCGAGAAATGATGCGTCAGGCTGGCATGGGCGGAAAGACATCTTCACCAAAGGATCGAGCTTTACATCGGCAGAGGGAGCGAACAAGATTTGCTTCTCCCAGCAAATAA | 1974 | 0.4488 | MQDIFGSVRRSLVFRGSPESDETSLGVGGSLVDKISYCIRTSRVFSKPSPPSPSPSIPEDAAPPIRWRKGELIGCGAFGQVYVGMNIDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAVLFHIGTTKSHPPIPDHLSAAAKDFLLKCLQKEPVLRSSASELLQHPFVTGEHMTSLTLSSNVTENFIASSPSCTPNDESILCSSTVNPLDSGNKQLWGMSNDDDDMCVIDDKEEFSHNDVKYKSLMSTDIESFNPMSDPSDDWGCKFDASSELENREVNFVTDENYMPPDQSGDDKGQPDFSFPGVPSLSEEDDELTESKIKAFLDEKALELKKLQTPLYEEFYNSLNTSCSPNVDRTSDDTASRNFLKLPPKSRSPNRVPISTPSKAIDNTGSPGSNGQSSSTVGHVNNHTSQDIPASPLNEWKGVIVDSQQQPSSPSLSFSERQRKWKEELDQELERKREMMRQAGMGGKTSSPKDRALHRQRERTRFASPSK | 657 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium8274g00009 | 657 | Coils | Coil | 100 | 127 | - | - | |
Vium8274g00009 | 657 | MobiDBLite | consensus disorder prediction | 508 | 657 | - | - | |
Vium8274g00009 | 657 | ProSiteProfiles | Protein kinase domain profile. | 67 | 330 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium8274g00009 | 657 | SUPERFAMILY | Protein kinase-like (PK-like) | 66 | 331 | IPR011009 | - | |
Vium8274g00009 | 657 | ProSitePatterns | Protein kinases ATP-binding region signature. | 73 | 96 | IPR017441 | GO:0005524 | |
Vium8274g00009 | 657 | MobiDBLite | consensus disorder prediction | 638 | 657 | - | - | |
Vium8274g00009 | 657 | Pfam | Protein kinase domain | 68 | 330 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium8274g00009 | 657 | MobiDBLite | consensus disorder prediction | 606 | 628 | - | - | |
Vium8274g00009 | 657 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 53 | 338 | - | - | |
Vium8274g00009 | 657 | SMART | serkin_6 | 67 | 330 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium8274g00009 | 657 | FunFam | Mitogen-activated protein kinase kinase kinase 2 | 66 | 359 | - | - | |
Vium8274g00009 | 657 | MobiDBLite | consensus disorder prediction | 588 | 605 | - | - | |
Vium8274g00009 | 657 | MobiDBLite | consensus disorder prediction | 445 | 476 | - | - | |
Vium8274g00009 | 657 | CDD | STKc_MAPKKK | 66 | 330 | - | - | |
Vium8274g00009 | 657 | MobiDBLite | consensus disorder prediction | 508 | 581 | - | - | |
Vium8274g00009 | 657 | Coils | Coil | 608 | 628 | - | - | |
Vium8274g00009 | 657 | Gene3D | Transferase(Phosphotransferase) domain 1 | 66 | 361 | - | - | |
Vium8274g00009 | 657 | FunFam | Serine/threonine-protein kinase STE11 | 63 | 157 | - | - | |
Vium8274g00009 | 657 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 191 | 203 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium8274g00009 | Vium-Chr8274 | 45046 | 50952 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium8274g00009 | 1 | 657 | MAP Kinase Kinase Kinase | AT1G54960 | 57.040 | 0.0 | 691 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE11 | Vium8274g00009 | Pkinase | 1.3e-71 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium8274g00009 | K20606 | - | gmx:100807537 | 1148.27 |