Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium825g00003 ATGGTTAAGGCTGACAGCTCCCTGCCTTGCTCACACCATGTGGCTTGGCAATCACCTTCTTTGAATTACTTAAGCATGCTGCCTAAGCCCGGCTCACTCGGTCTCCCAACATATCTGAACTCAAGCACTTCCATCTTACCTCATGGGCTTGTAGCTCCTTCTATTCAAAGTCTGAAGACTCAGCTAACAAATGAAGTGCAAGGATACCTTAAGTATCACAACGTAGACACAAGCCTGAAAGAAACGCATCTTGGAGGAGCTTTACAAAATGCAAATCCTTCTTTGCAAAAGAGGTTACTTATCTTTGACCGCTCTGATAATAAGACAAGGTTGTTTTATGGGCATGTTCCTCCTCTTGTCCAGAGTCCAATTGTCACTGCTAAGAAGATTGCTCAAAGTTATGACGTAAATGGGGAGGAACAGGCTAGAATTATGGGTCAAAAGCATCTTGCCAGCTATGGTTTACTGGAAGAGTCTGTTAAGGATAATGCAGTTATTGAAGAAAGTGAAAAGCATGAAGATACGGAAGAAATAAATGCATTGCTTTATTCCGATGATGACAGCAGTGAATATGATGAGGATAATTGTGATGAGGTAACAAGTACAGATCGTTCTCCTTTGGCAACTAAAAGGACTTATGCGATACAAGAACAATGTGAGGACTTAAAGGAGGAAGTTGCCAGCTCTTATTGGCCTAAGAAAAAGATGAAGTTAATTACTGGTGGCGACAATAGGTCATCCCCACGTGTGGACAAAACTACCGTGGTACAACCAAATGAAACCTGTGATTATGTTAGTGATGCTGAATCAAAGAACTCTAGTGGTTGGACATATTCTGTTGATAAAACTAAAGTAGATGATTCAGTGGTGTGTGATATCAAATTAAAAAAGGATAAGATCCGGGAATCTTTGAGAGTTCTGGAGAATTTAATTCCTGGTGCAAAAGGAAAGGAGCCAATGTTAGTCATTGATGGAACTATTGAGTACTTGAAAGTTTTGATGTCCCAAACTGGTTCTCTTGGGGTAGAATATCACTAA 1038 0.4046 MVKADSSLPCSHHVAWQSPSLNYLSMLPKPGSLGLPTYLNSSTSILPHGLVAPSIQSLKTQLTNEVQGYLKYHNVDTSLKETHLGGALQNANPSLQKRLLIFDRSDNKTRLFYGHVPPLVQSPIVTAKKIAQSYDVNGEEQARIMGQKHLASYGLLEESVKDNAVIEESEKHEDTEEINALLYSDDDSSEYDEDNCDEVTSTDRSPLATKRTYAIQEQCEDLKEEVASSYWPKKKMKLITGGDNRSSPRVDKTTVVQPNETCDYVSDAESKNSSGWTYSVDKTKVDDSVVCDIKLKKDKIRESLRVLENLIPGAKGKEPMLVIDGTIEYLKVLMSQTGSLGVEYH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium825g00003 345 PANTHER TRANSCRIPTION FACTOR BHLH145 10 343 IPR037546 -
Vium825g00003 345 MobiDBLite consensus disorder prediction 184 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium825g00003 Vium-Chr825 63566 67292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium825g00003 85 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 34.191 3.58e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium825g00003 - - gmx:100817942 511.531