Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8253g00002 ATGGAGACGAAGCCGAGCGAGATCAGCAGTGGCAAGATGTTCGGAGGCTACAACAAGAGGTTCAAGCATTTCAGTCCCACACTCGGCTGCTCCATGAACTTCCACATCTACTTCCCTCCTTCTCCTTCCCCCTCTCACAAATTCCCAGTTCTGTATTTTCTCGCTGGCCTCACATGCACCGATGAAAACTTCATATTCAAGTCTGGTGCTCAACGCGCAGCTGCTGCTGAGGGCATTGCCTTGGTTACTCCCGACACTTCCCCAAGAGGCTTGAATGTGGAAGGAGAAGCTGACAGCTGGGATTTTGGAGTAGGTGCTGGATTTTATCTCAATGCCACACAAGAGAAATGGAAAAATTGGCGCATGTACGACTATGTTGTCAAGGAATTGCCAAAGCTTCTCAGTGATAATTTTCCACAGCTCGAAACATCAAAGGCTTCTATATTTGGTCATTCTATGGGTGGGCATGGTGCTCTGACTATCTACCTGAAAAATCAGGATAAGTATAAGGTTCATGCTTTCCTTATTGGATATTTGGTACCAAAATCTAATGATAATCTTCTTTTGTTTCATTTAAGGTCCAATTAG 588 0.449 METKPSEISSGKMFGGYNKRFKHFSPTLGCSMNFHIYFPPSPSPSHKFPVLYFLAGLTCTDENFIFKSGAQRAAAAEGIALVTPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFPQLETSKASIFGHSMGGHGALTIYLKNQDKYKVHAFLIGYLVPKSNDNLLLFHLRSN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8253g00002 195 Pfam Putative esterase 25 181 IPR000801 -
Vium8253g00002 195 SUPERFAMILY alpha/beta-Hydrolases 8 185 IPR029058 -
Vium8253g00002 195 Gene3D alpha/beta hydrolase 6 187 IPR029058 -
Vium8253g00002 195 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 6 171 IPR014186 GO:0018738|GO:0046294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8253g00002 Vium-Chr8253 7 4181 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8253g00002 1 174 Carbohydrate Esterase AT2G41530 82.286 1.14e-102 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8253g00002 K01070 - gmx:100786814 326.25