Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8253g00001 ATGGAGACGAAGCCGAGCGAGATCAGCAGTGGCAAGATGTTCGGAGGCTACAACAAGAGGTTCAAGCATTTCAGTCCCACACTCGGCTGCTCCATGAACTTCCACATCTACTTCCCTCCTTCTCCTTCCCCCTCTCACAAATTCCCAGTTCTGTATTTTCTCGCTGGCCTCACATGCACCGATGAAAACTTCATATTCAAGTCTGGTGCTCAACGCGCAGCTGCTGCTGAGGGCATTGCCTTGGTTACTCCCGACACTTCCCCAAGAGGCTTGAATGTGGAAGGAGAAGCTGACAGCTGGGATTTTGGAGTAGGTGCTGGATTTTATCTCAATGCCACACAAGAGAAATGGAAAAATTGGCGCATGTACGACTATGTTGTCAAGGAATTGCCAAAGCTTCTCAGTGATAATTTTCCACAGCTCGAAACATCAAAGGCTTCTATATTTGGTCATTCTATGGGTGGGCATGGTGCTCTGACTATCTACCTGAAAAATCAGGATAAGTATAAGGTCCAATTAGAACGTTCCTTTTTCATATGTTATAGCTATGCAAGTTTGGAATGA 564 0.4592 METKPSEISSGKMFGGYNKRFKHFSPTLGCSMNFHIYFPPSPSPSHKFPVLYFLAGLTCTDENFIFKSGAQRAAAAEGIALVTPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFPQLETSKASIFGHSMGGHGALTIYLKNQDKYKVQLERSFFICYSYASLE 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8253g00001 187 Gene3D alpha/beta hydrolase 6 177 IPR029058 -
Vium8253g00001 187 SUPERFAMILY alpha/beta-Hydrolases 8 170 IPR029058 -
Vium8253g00001 187 Pfam Putative esterase 25 170 IPR000801 -
Vium8253g00001 187 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 6 170 IPR014186 GO:0018738|GO:0046294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8253g00001 Vium-Chr8253 7 4181 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8253g00001 1 170 Carbohydrate Esterase AT2G41530 82.941 1.23e-102 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8253g00001 K01070 - gmx:100786814 325.865