Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8203g00001 ATGGAGAGCTTTGCTCTGCATTCTCTCTCACCATCAACCTCAACCTCCTTCTCTCGCTTCTCCCAACTCCGTCATCGTCCTCGCTCCGTCATCTCCAGATCCCAATTCTCTCACGCCACTCCGTCAGCTCTCCGATCACCCATCATCATCTCCCAACCCTTCTCCTTCCCTTCCAAACCCAAAGCCTTTAAATTCAACCCCTTTTCGAAACCCCATTACCCAATTCAAGCTTCTTCATCGCCTCCTCCACCTTCAAAGTCCTCATCACCAACACCGACACCTCTTCAGGGTGCAAAGCCCTTGCCTTTTGTGATCTCCGTAGGCATAGGCCTCATTGTTCGCTTCTTCGTCCCCAAACCGGTGGAAGTCACCCCCGAGGCCTGGCAACTCCTCTCCATTTTCCTCTCCACCATCGCGGGCCTCGTTCTCAGCCCGCTCCCCGTCGGTGCATGGGCCTTTCTGGGCCTCACGGCAACCGTCGTCACCAAGACTCTCACTTTCTCAGCAGCCTTCGGCGCCTTCACCAATGAGGTGATCTGGCTCATTGTCATTTCCTTCTTCTTTGCTCGTGGATTCGTGAAGACCGGACTCGGAGATAGGATTGCCACCTACTTCGTAAAGTGGATGGGAAAGAGCACTCTGGGCCTCTCTTATGGGCTCACTTTCAGTGAAGTTCTGATTGCTCCTGCAATGCCTAGCACCACCGCCAGGGCTGGTGGGGTTTTCTTGCCCATTATCAAGTCACTCTCACTCTCCGCTGGCAGTGAACCCGACTCTCCCTCGGCTAAGAAACTCGGGGCTTACCTCGTTCAGAACCAATTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTAACTGCTGCAGCTCAAAATCTGCTGTGTATCAAATTAGCAGAGGAGCTTGGGGTGATAGTTCCAAACCCTTGGGTCACTTGGTTTAAGGCAGCTAGTTTACCCGCACTTGTTTGTCTTCTTCTCACACCATTGATTTTGTACAAGCTCTATCCCCCCGAAATCAAGGACACTCCAGAGGCTCCTGCCCTGGCTGCCAAGAAACTGGAAAGTATGGGCCCTGTCACAAAAAATGAATGGATTATGGTTGTCACAATGCTTCTTGCAGTGTCTTTGTGGATCTTTGGAGACACTATTGGCATAGCAAGTACTGTAGCTGCAATGATCGGTTTATCAATACTTCTCCTAACAGGAGTTCTTAACTGGAATGACTGCTTGGATGAGAAATCGGCATGGGATACCTTAGCTTGGTTTGCCATTTTGGTCGGTATGGCAAGCCAGTTGACAAACCTTGGAATTGTGAACTGGATGTCTGACTGTGTGGCCAACAACCTTCGGTCGTTCTCTTTGAGCTGGCCAGCCGCACTAGCTGTTCTTCAGGCAGCTTATTTCTTCATCCACTACCTTTTCGCTAGTCAGACTGGACATGTGGGGGCTTTATACTCTGCTTTTCTTGCCATGCATAGGGCAGCCGGTGTTCCTGGCATTCTGGCAGCACTTGCTTTAGGTTACAATACAAATCTTTTTGGTGCAATAACACACTATAGTAGTGGCCAGGCTGCTGTATACTATGGAGCTGGTTATGTAGACCTTCCGGATATCTTCAAAATGGGGTTCATCATGGCTGTCATTAATGGTATCATCTGGGGAGGTGTTGGTTCTTTGTGGTGGAAATTTTTGGGCTTGTACTGA 1704 0.4988 MESFALHSLSPSTSTSFSRFSQLRHRPRSVISRSQFSHATPSALRSPIIISQPFSFPSKPKAFKFNPFSKPHYPIQASSSPPPPSKSSSPTPTPLQGAKPLPFVISVGIGLIVRFFVPKPVEVTPEAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTATVVTKTLTFSAAFGAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPDSPSAKKLGAYLVQNQFQSAGNSSALFLTAAAQNLLCIKLAEELGVIVPNPWVTWFKAASLPALVCLLLTPLILYKLYPPEIKDTPEAPALAAKKLESMGPVTKNEWIMVVTMLLAVSLWIFGDTIGIASTVAAMIGLSILLLTGVLNWNDCLDEKSAWDTLAWFAILVGMASQLTNLGIVNWMSDCVANNLRSFSLSWPAALAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGILAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFKMGFIMAVINGIIWGGVGSLWWKFLGLY 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8203g00001 567 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 70 567 IPR030676 -
Vium8203g00001 567 MobiDBLite consensus disorder prediction 1 21 - -
Vium8203g00001 567 Pfam Sodium:sulfate symporter transmembrane region 106 566 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vium8203g00001 567 NCBIfam DASS family sodium-coupled anion symporter 119 561 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vium8203g00001 567 MobiDBLite consensus disorder prediction 75 94 - -
Vium8203g00001 567 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8203g00001 Vium-Chr8203 3365 6857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8203g00001 1 567 Antiporters AT5G64290 72.329 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8203g00001 - - gmx:100782873 941.414