Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium817g00009 ATGCAATTGTATCATCATCCATTTGATTTGGACAGCCAGAAGGTGAGACTTGCGTTGGAAGAGAAAAGCATTGATTACACATCACACCATGTCAATCCTGTAACTGGCAAGAACTTGGATTCTTCATTCTTCAAGATGAATCCTGGTGGAAGACTCCCAGTTTTCCAAAATGGCTCTCACATTCTTTACAAGACTATTGATATAATCCAGTACATAGAAAGAATTGCCGTGTTCTCCTCTGGGTCTGAAAATATCAGTAGCAGTAACAAGGAAGTGATTGAATGGATGCAGAAGGTACAAGAGTGGAATCCAAAGTATTTTTCCCTTTCCCATGTACCAGAGAAATACAGAATATATGTTTCTAAGTTCTTAAGAAGAGTGGTGATTGCTCGAATGTCTGAGTCACCAGAACTAGCAGGTGCTTACCATAAGAAGTTAAAAGAAGCATATCAGACTGAAGAGAGAGTGAAAGATTCAGATGTGTTTATAAGGAGCAAGGAGCATTTGATTAGGCTGCTTGATGAAGCAGAGAAGCAGCTGAGTGAAACACCTTATTTAGCAGGTCAAGAGTTTACTATGGCTGATGTGATGCTCGTTCCGGTATTGTCTCGTTTAGTGCTCTTGGATTTAGAGAAAGAGTACATAACTGGGAGGCCAAACATTGCTGAGTATTGGGTTTTGGTTCAGCAGAGGCCTAGTTATAGGAAAGTGATTGGTAGGTATTTTGATGGTTGGAAAAAGCACAAGACATTGTTAAAAACTTGGTGCTTTGTTCGCGTTAGAAGTTTGCTGAAGAGATATTGA 804 0.398 MQLYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFSSGSENISSSNKEVIEWMQKVQEWNPKYFSLSHVPEKYRIYVSKFLRRVVIARMSESPELAGAYHKKLKEAYQTEERVKDSDVFIRSKEHLIRLLDEAEKQLSETPYLAGQEFTMADVMLVPVLSRLVLLDLEKEYITGRPNIAEYWVLVQQRPSYRKVIGRYFDGWKKHKTLLKTWCFVRVRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium817g00009 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Vium817g00009 267 CDD GST_N_family 1 73 - -
Vium817g00009 267 Gene3D - 119 238 - -
Vium817g00009 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Vium817g00009 267 SUPERFAMILY GST C-terminal domain-like 153 239 IPR036282 -
Vium817g00009 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 113 252 IPR010987 -
Vium817g00009 267 Pfam Glutathione S-transferase, C-terminal domain 166 224 - -
Vium817g00009 267 Gene3D Glutaredoxin 1 75 - -
Vium817g00009 267 CDD GST_C_family 148 225 - -
Vium817g00009 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Vium817g00009 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium817g00009 Vium-Chr817 61497 64288 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium817g00009 1 267 Glutathione S-transferase Gene Family AT1G77290 66.667 3.77e-140 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium817g00009 K22077 - gmx:100792543 504.982