Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8165g00003 ATGGAATTTCAACTGTCACTCCTTTGTTTGATCTCCACCATCGTCATTGCACTCATACTATGGAGAAAACAAAAGAAGACCCTCCTTCCACCAAGTCCAATGGCCCTCCCCATCATTGGTCACCTCCACCTTCTCTCCACAATACCTCACCGAGATTTTCACAAGCTCTCAATCCGTTATGGACCCATCATGCACCTTTTCCTCGGTTCAGTCCCTTGTGTGGTGGCTTCAACCGCAGAAGCCGCCAAAGACTTCCTCAAAACTCACGAATCCACCTTCTCCAACCGCATTACTCAAACCGTCGCCATTGAGGCCTTAACCTACGGCTTCCAAGACTTTTTCTTCGCACCTGACGGACCCTATTGGAGGTTCATGAGGAAACTGTGCATGTCTGAACTTCTCGGTGGCCACATGTTAGACCAGCTCCTTCCCGTGAGGCAGCAAGAGAGCAAGAGATTCATCCAACACCTGCTCCGAAAAGGGGTGGCTGGTGAGGCCGTGGATTTTGGAGGAGAGTTGATGACACTCTCGAATAACATCGTGTCGAGAATGACTGTGGGTCACACGAGTACTGAAAACGAGAAGGACGTTGAAGAGATGAGAAAGCTGGTGGCGGATGCCGCAGAGCTTGTGGGGAAGTTCAACATATCGGACTTCCTTTGGTTCTTGAAGCGTCTCGATTTGCAGGGATTCAACATGAGGCTCAAGCAAACTCGGGACAGGTTTGATGCTGTGTTAGACAGAATCATAAAGCAGCGTGAAGAGGAAAGAAGGAGCAACAAACAAACCGATGGAACACGTCCGTTTAAGGATATGCTTGATGTTTTGTTGGACATCTTCGAAGATGAGAGTTCTGAAATAAAACTAAACAAAGAGAATATTAAGGCCTTCATCCTGGACATATTTGTTGCTGGGACTGACACGACATCACTAACCATTGAATGGGCTCTGTCAGAGTTAATAAACCATCCACATGTGTTGGAGAAGGCAAGGCTAGAAATAGATGCAGTTGTTGGAAAGAGTAGAATCGTAGAAGAATCAGACATTAAGAACCTTCCTTACCTGCAAGCCGTTGTTAAAGAAACATTCAGGCTTCACCCACCTGGTCCATTACTTATTAGAGAGTCATCAACAAGTGAAGTGGTGTGTGGATATAATATTCCAGCCAAAACTCGATTATTTATCAACATTTGGGCTATTGGCAGAGACCCCAATCAGTGGAAAAACCCTCTTGAGTTCATGCCAGAGAGGTTTATTGATGAAGATGGAAATGTGCATAGTAAATTTGATGTTAGGGGACAAAGTTATCATCTTCTTCCTTTTGGAACTGGAAGAAGAAGGTGCCCTGCTATTTCTCTGGCATTACATGTTCTGCATGTGAATCTTGCTGCACTCATTCAGTGTTTCCAATTGAAGGTTAATGGTGGAGATGGCAAGGTGGACATGGAAGAAAAGCCAGGTCTCACTCTTCCAAGGGCTCACCCCTTAATCTGTGTTCCTGTTCCAAGGCTTAGCCCATTCCCTGCAATATGA 1533 0.4566 MEFQLSLLCLISTIVIALILWRKQKKTLLPPSPMALPIIGHLHLLSTIPHRDFHKLSIRYGPIMHLFLGSVPCVVASTAEAAKDFLKTHESTFSNRITQTVAIEALTYGFQDFFFAPDGPYWRFMRKLCMSELLGGHMLDQLLPVRQQESKRFIQHLLRKGVAGEAVDFGGELMTLSNNIVSRMTVGHTSTENEKDVEEMRKLVADAAELVGKFNISDFLWFLKRLDLQGFNMRLKQTRDRFDAVLDRIIKQREEERRSNKQTDGTRPFKDMLDVLLDIFEDESSEIKLNKENIKAFILDIFVAGTDTTSLTIEWALSELINHPHVLEKARLEIDAVVGKSRIVEESDIKNLPYLQAVVKETFRLHPPGPLLIRESSTSEVVCGYNIPAKTRLFINIWAIGRDPNQWKNPLEFMPERFIDEDGNVHSKFDVRGQSYHLLPFGTGRRRCPAISLALHVLHVNLAALIQCFQLKVNGGDGKVDMEEKPGLTLPRAHPLICVPVPRLSPFPAI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8165g00003 510 FunFam Cytochrome P450 family protein 21 498 - -
Vium8165g00003 510 CDD CYP93 61 500 - -
Vium8165g00003 510 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vium8165g00003 510 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 Pfam Cytochrome P450 30 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 499 - -
Vium8165g00003 510 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00003 510 SUPERFAMILY Cytochrome P450 30 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8165g00003 Vium-Chr8165 17019 19274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8165g00003 7 503 Cytochrome P450 AT5G06900 49.699 3.77e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8165g00003 K24188 - gmx:100815706 778.474