Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8165g00002 ATGGCTGATTACCAAGACTACATCCTTCTTTTCATCACATTTTTAGTCTCCACATTCGTGGTTCGAGCCATACTCAGCAGAAAACAAAACAAGACTAATAATAGACCACCAAGTCCACGAGCCTTACCCATCATTGGACATCTCCACCTTCTGGCTCCAATACCTCACCAGGCTCTTCACAAGCTCTCTACTCGCTATGGTCCCATAATGCACCTTTTCCTTGGCTCCGTCCCTTGTGTCGTCGCTTCCACGCCAGAAGCTGCCAGAGAATTCCTAAAAACTCACGAAACCCGTTTCTCCAACCGCCCGCAAAGTTCTGCAGTTGATTTTCTGACATACGGCTCCCAGGACTTCTCCTTTGCGCCATATGGACCTTATTGGAAGTTCATGAAGAAAATATGCATGTCTGAACTTCTGGGGGGTTCCACGTTAACTCAGCTACTTCCTGTGAGGAGACAAGAGACGATAAGGTTTCTGAGGCTTATGCTCAAGAAAGGGAAGGCGGGTGAGGCTGTTGATGTTGGGGGCGAACTTCTAAGACTCTCGAATAACGTTGTGTCGAGGATGATTATGAGCCAAACATGTTCCGAAGATGACAGTGAAGCCGAAGAGGTGAGGAAGTTGGTGCAAGACACTGTTCTTCTCACGGGGAAGTTTAATGTGTCGGATTTCGTTTGGTTCTTTAAGAACTGGGACGTGCAGGGGTTCGGGAAGAGACTGAAGGAAATTCGGGACAGGTTTGACACCATGATGGAGAGGGTGATCAAGGAGCATCAAGAGGAAAGAAAGAAGAGAAGGGAAGTGGGAAGAGGAAGAGATGATGATCAAATCAAGGATCTACTTAATGTGTAA 852 0.4695 MADYQDYILLFITFLVSTFVVRAILSRKQNKTNNRPPSPRALPIIGHLHLLAPIPHQALHKLSTRYGPIMHLFLGSVPCVVASTPEAAREFLKTHETRFSNRPQSSAVDFLTYGSQDFSFAPYGPYWKFMKKICMSELLGGSTLTQLLPVRRQETIRFLRLMLKKGKAGEAVDVGGELLRLSNNVVSRMIMSQTCSEDDSEAEEVRKLVQDTVLLTGKFNVSDFVWFFKNWDVQGFGKRLKEIRDRFDTMMERVIKEHQEERKKRREVGRGRDDDQIKDLLNV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8165g00002 283 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00002 283 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00002 283 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00002 283 Gene3D Cytochrome P450 27 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00002 283 Pfam Cytochrome P450 36 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00002 283 SUPERFAMILY Cytochrome P450 32 279 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00002 283 MobiDBLite consensus disorder prediction 258 283 - -
Vium8165g00002 283 PANTHER CYTOCHROME P450 93A3-LIKE 11 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8165g00002 Vium-Chr8165 14568 16393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8165g00002 1 263 Cytochrome P450 AT5G06900 46.792 1.07e-82 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8165g00002 K24188 - pvu:PHAVU_001G1395001 486.108