Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8165g00001 ATGGATGCAGCTGGTGCTACCTTTTTGAGTTACATCACCTCGTTCTCCTTAGCCTTCCTTGTTTTGACTCTACTTTTCAAGTCCCTTAGCATTTTAAGAACCAAAAATGGCAGTGTACGACCTCCACCAACTCCACCGTCACTTCCCATCATCGGCCATCTCCACCTTGTGGGTTCCGTCGTCCCAAAATCATTCCAAGTTCTGGCTCGTCAATATGGCCCTCTCCTTCAGCTCCGTTTAGGTGCCTCAACATGCGTAGTTGTCTCCAACGCCCAAGTCGCCAAAGAAGTGATGAAAACGCATGACCTCAATTTCTGCAACCGACCCCAGTTTGGATCCGCAGACAACTTCTTATACAAAGGTTCTAGTTTCGTCACTGTCCCATATGGCCCTTATTGGCGCTTCATCAAGAAGCTTTGCGTTACTCAGCTTCTCTCCACAACGCAGTTTGGGCGCTTCCGGCACATCAGAGAGCAGGAGATACATAAGCTCTTGAAATCTCTTGCGGAGTGTTCCTCCGAAGGAAGGGACACGGATTTGAGCCATGAACTCACTGCTTTGACCAACAACATCCTGTGTCGGATGGCCATGAGTACGAGCTGTTTGGACAACGTTAACGATGCCGAGGATATTCTTGGCCTGGTGAGGGAGTTCATGCACTTAGGAGCTAAGTTGAGCATGGGTGAAGTGTTGGGACCGTTGGGAAAGTTTGACTTGTTTGGGTATGGGAAGAAGCTTGCTAGAGTAGTTGGCAAATTCGATCAGGTTTTGGAGCGCATCTTAGAGGAACATGAAGTGAAAAACTCCGAAAGAGGAGACATGATGGATATTCTACTGCGAGTCCACAAAGATCCTAATGCTGAAATGAAGTTAACAAGGAATGATATCAAGGCCTTCTTCCTGGATATTTTCCTAGCGGGAACAGACACGTCTTCAACAGCGTCCCAATGGGCCATGGCAGAAATCATGAACAACCCAGGAGTGTTGAGGAAGGTGAGGGCAGAGATTGATGCAGTGGTGGGTTCTAGCCGGTTGGTCACTGAATCAGACCTTCCAGATCTTCGTTATCTCCAAGCTGTTGTGAAGGAAGTTCTAAGACTCCACCCAACAGCAGCGTTTGCTCTTAGAGAATCGGCAGAGGACTGCACCATCAACGGGTATGGTATAAAGGGCCAGACACGGACACTGATCAATGTGTACGCCATCATGCGGGACCCAGAAGCGTGGGCCAACCCAGAGGAGTTTATACCAGAAAGGTTCTTGGAAGACAGTGATGGGATGAAGGGTGGAGCTGAAGGCATAACTACAATGAACGGTGGTGATTTCAGGTACCTTCCATTTGGGTCTGGGAGGAGGGGATGCCCTGGATCTTCCCTTGCCTTAACTGTCATACAAGTGACAGTTGCATCACTGATCCAATGTTTTGAATGGAAGACGAAAGAGGGAGAGAGGGTTTGTTTGGAAGAAGGGTCATCATTTTCTACAGGATTGGCAAAGCCACTTGTTTGTAATCCTGTTACTCGTTTTACTCCTTTTTAA 1539 0.4795 MDAAGATFLSYITSFSLAFLVLTLLFKSLSILRTKNGSVRPPPTPPSLPIIGHLHLVGSVVPKSFQVLARQYGPLLQLRLGASTCVVVSNAQVAKEVMKTHDLNFCNRPQFGSADNFLYKGSSFVTVPYGPYWRFIKKLCVTQLLSTTQFGRFRHIREQEIHKLLKSLAECSSEGRDTDLSHELTALTNNILCRMAMSTSCLDNVNDAEDILGLVREFMHLGAKLSMGEVLGPLGKFDLFGYGKKLARVVGKFDQVLERILEEHEVKNSERGDMMDILLRVHKDPNAEMKLTRNDIKAFFLDIFLAGTDTSSTASQWAMAEIMNNPGVLRKVRAEIDAVVGSSRLVTESDLPDLRYLQAVVKEVLRLHPTAAFALRESAEDCTINGYGIKGQTRTLINVYAIMRDPEAWANPEEFIPERFLEDSDGMKGGAEGITTMNGGDFRYLPFGSGRRGCPGSSLALTVIQVTVASLIQCFEWKTKEGERVCLEEGSSFSTGLAKPLVCNPVTRFTPF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8165g00001 512 FunFam Cytochrome P450 family protein 33 503 - -
Vium8165g00001 512 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 20 495 - -
Vium8165g00001 512 Gene3D Cytochrome P450 29 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 Pfam Cytochrome P450 42 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 CDD CYP93 73 505 - -
Vium8165g00001 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vium8165g00001 512 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium8165g00001 512 SUPERFAMILY Cytochrome P450 39 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8165g00001 Vium-Chr8165 7301 9321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8165g00001 12 512 Cytochrome P450 AT2G42250 52.871 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8165g00001 - - gmx:106794180 759.214