Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium8158g00048 | ATGGCCATGATGGTGACGGAGGGCAACGACAGCTGCGGCAGCGGAGTGCAGCACTATAGCAATTCCTCCTCCTCCTCGCCGGCGCAAACTCGTCAGCAGCGCCACAAGGTCGAAGTATACAATGAGATTCTTCGCCGCTTGAAAGATTCCGGCCACGAAGATGCTATGCAACCTGGCTTCAACGATCAGCTTTGGGCTCACTTCAATCGCCTTCCCACACGGTACGCGCTGGATGTGAATGTGGAAAGGGCGGCTGATGTTCTTATGCACAAGAGATTATTGCAGTTGGCGCATGATCCTGCTAATAGGCCTTCAATTGAAGTTAGATTAGTTCAGGTTCATCCCATATCTGATGGAAACTCAGCTGATGCTTCTGAATTGGATGATCCTGGGACAGAATCTGGTCAAAGTTCTTCAAAGTACTCTAGCAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCATTGGCTCTTGAAGCAAATAGTTCTGAAGACATAGAGGAGGAACAATCTGTACATGCCAATGTTCAATATTCACGACCCATGCATGAAATCACCATCTCAACAGATGACAAGCCAAAGCTTCTTAGCCAGTTAACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAAGCACACGCCTTTTCTACAACTGATGGTTACTCATTAGATGTATTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAAAATCTGAAAGCAGCTTTAGAAAGAGAAGTCTTGAAGAAGATTGAGAGACAGGTGAGGTTCAGTCCGCAATCTGTATCTTCTGTTGATGAGCCTGATCAACCAAAGATGAAAACTGAACTGGATCATTTGACAATACCAAATGATGGGACAGATGTTTGGGAAATAGATCCTAAACATTTGAAATATGGAACTCAAATTGCATCTGGGTCATATGGTGAACTATTTAAAGGTGTATACTGTAGCCAGGAAGTAGCGATCAAAGTTCTCAAGCCTGAGCATGTAAATTCAGAATTGCAGAAAGAGTTTGCACAAGAAGTCTATATCATGAGAAAGGTTCGACACAAGAATGTTGTACAATTCATAGGAGCATGTACCAAGCCCCCACGTTTATGCATAGTGACAGAATTTATGTCAGGTGGAAGTGTGTATGACTACCTACATAAGCAGAGGGGCTTTTTTAAATTTCCTACCCTGCTTAAAGTCGCAATTGATATTTCTAAAGGGATGAACTACTTGCACCAACATAACATAATCCATAGAGACTTGAAGGCTGCCAACCTTTTGATGGACGAAAATTGTGTTGTAAAGGTTGCTGATTTTGGGGTTGCTAGAGTTAAAGCTCAGTCTGGTGTTATGACAGCAGAAACTGGAACATATAGATGGATGGCTCCTGAGGTTATAGAACACAAGCCGTATGATCACAAGGCTGATGTATTTAGTTTTGGAATTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCATACGAATATTTAACCCCCCTTCAGGCAGCTATAGGAGTGGTTCAAAAGGGTTTGCGACCCACCATCCCCAAGAACACTCATCCAAAATTTGTTGAACTTCTTGAGAGATCCTGGCAGCAAGATCCAACATTGAGACCCGATTTCTCTGAAATTATCGACATCCTGCAGCAATTGGCGAAGGAGGTATAA | 1683 | 0.4326 | MAMMVTEGNDSCGSGVQHYSNSSSSSPAQTRQQRHKVEVYNEILRRLKDSGHEDAMQPGFNDQLWAHFNRLPTRYALDVNVERAADVLMHKRLLQLAHDPANRPSIEVRLVQVHPISDGNSADASELDDPGTESGQSSSKYSSRQSIHPPPAFGSSPNLEALALEANSSEDIEEEQSVHANVQYSRPMHEITISTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETENLKAALEREVLKKIERQVRFSPQSVSSVDEPDQPKMKTELDHLTIPNDGTDVWEIDPKHLKYGTQIASGSYGELFKGVYCSQEVAIKVLKPEHVNSELQKEFAQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQRGFFKFPTLLKVAIDISKGMNYLHQHNIIHRDLKAANLLMDENCVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERSWQQDPTLRPDFSEIIDILQQLAKEV | 560 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium8158g00048 | 560 | ProSiteProfiles | ACT domain profile. | 190 | 267 | IPR002912 | - | |
Vium8158g00048 | 560 | Coils | Coil | 240 | 260 | - | - | |
Vium8158g00048 | 560 | ProSiteProfiles | Protein kinase domain profile. | 304 | 557 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium8158g00048 | 560 | CDD | ACT_TyrKc | 188 | 255 | - | - | |
Vium8158g00048 | 560 | PRINTS | Tyrosine kinase catalytic domain signature | 480 | 502 | IPR001245 | GO:0004672|GO:0006468 | |
Vium8158g00048 | 560 | PRINTS | Tyrosine kinase catalytic domain signature | 461 | 471 | IPR001245 | GO:0004672|GO:0006468 | |
Vium8158g00048 | 560 | PRINTS | Tyrosine kinase catalytic domain signature | 415 | 433 | IPR001245 | GO:0004672|GO:0006468 | |
Vium8158g00048 | 560 | PRINTS | Tyrosine kinase catalytic domain signature | 378 | 391 | IPR001245 | GO:0004672|GO:0006468 | |
Vium8158g00048 | 560 | PRINTS | Tyrosine kinase catalytic domain signature | 524 | 546 | IPR001245 | GO:0004672|GO:0006468 | |
Vium8158g00048 | 560 | MobiDBLite | consensus disorder prediction | 130 | 152 | - | - | |
Vium8158g00048 | 560 | MobiDBLite | consensus disorder prediction | 118 | 157 | - | - | |
Vium8158g00048 | 560 | Pfam | Protein tyrosine and serine/threonine kinase | 304 | 552 | IPR001245 | GO:0004672|GO:0006468 | |
Vium8158g00048 | 560 | Gene3D | - | 187 | 261 | - | - | |
Vium8158g00048 | 560 | SMART | serkin_6 | 304 | 557 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vium8158g00048 | 560 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 421 | 433 | IPR008271 | GO:0004672|GO:0006468 | |
Vium8158g00048 | 560 | CDD | STKc_MAP3K-like | 310 | 553 | - | - | |
Vium8158g00048 | 560 | MobiDBLite | consensus disorder prediction | 10 | 34 | - | - | |
Vium8158g00048 | 560 | Gene3D | Phosphorylase Kinase; domain 1 | 294 | 382 | - | - | |
Vium8158g00048 | 560 | SUPERFAMILY | Protein kinase-like (PK-like) | 288 | 553 | IPR011009 | - | |
Vium8158g00048 | 560 | Gene3D | Transferase(Phosphotransferase) domain 1 | 383 | 560 | - | - | |
Vium8158g00048 | 560 | FunFam | Serine/threonine-protein kinase isoform 1 | 294 | 382 | - | - | |
Vium8158g00048 | 560 | SUPERFAMILY | ACT-like | 188 | 254 | IPR045865 | - | |
Vium8158g00048 | 560 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 31 | 556 | - | - | |
Vium8158g00048 | 560 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium8158g00048 | Vium-Chr8158 | 230778 | 240025 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium8158g00048 | 4 | 514 | MAP Kinase Kinase Kinase | AT4G38470 | 72.904 | 0.0 | 726 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Vium8158g00048 | PK_Tyr_Ser-Thr | 5.5e-72 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium8158g00048 | - | - | gmx:100805180 | 1043.49 |