Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8158g00025 ATGTCAACCTCTGACGGCACCACTAACGGCGTCTCTAACGCCTCAATCATTGACCCGCAACGCCAGCAGCCCCAGGCGTTGGCCGTCAAGAAGCCACCGTCCAAGGACCGCCACAGCAAGGTCGACGGACGCGGCCGCCGCATACGAATGCCCATCATCTGCGCCGCCAGAGTCTTCCAGCTAACGCGGGAGCTGGGTCACAAGTCAGACGGCCAGACCATCGAGTGGCTCCTGCGCCAGGCCGAGCCTTCCATCATCGCCGCCACCGGCACAGGCACCACGCCCGCCAGCTTCTCCTCCGTCTCCCTCTCCGTACGCGCCGCCAACTCCGCGTCTCTCTCCTCGCCTTCCTCCGCCTCCGACCACAAGCCGCAGCTCCTCGCTCCCACGCCCTTCATCCTCGGCAAGCGCATACGCACCGACGATGACACTTCCAAGGACGACGCTGTTTCCGTGGGCCCCTCCCTCGTGGGCCCCTCTACCCCGCCCGGACTGTGGGCCCTCCCTGCTCGCCCCGATTTCGGACAAATTTGGAGCTTCGCCGCCGCTCCAGAAATGGTCGTGCAGCCCGCCGCCGTGTCGGTGTCGCAACAGCAGGCCTCGCTCTTTGCTCATCACCAACGTCAGCAGCAGCAGGCCATCGGAGAAGCGTCGGCGGCTAGGGTGGGGAATTACCTTCCGGGACATCTGAATTTACTGGCTTCGTTGTCCGGCGGACCTGGGAATTCTGGTCGGAGGGATGGCGAGCATCGTTGA 756 0.6468 MSTSDGTTNGVSNASIIDPQRQQPQALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSLSVRAANSASLSSPSSASDHKPQLLAPTPFILGKRIRTDDDTSKDDAVSVGPSLVGPSTPPGLWALPARPDFGQIWSFAAAPEMVVQPAAVSVSQQQASLFAHHQRQQQQAIGEASAARVGNYLPGHLNLLASLSGGPGNSGRRDGEHR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8158g00025 251 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 223 IPR005333 GO:0003700
Vium8158g00025 251 MobiDBLite consensus disorder prediction 1 47 - -
Vium8158g00025 251 Pfam TCP family transcription factor 34 125 IPR017887 -
Vium8158g00025 251 MobiDBLite consensus disorder prediction 31 47 - -
Vium8158g00025 251 ProSiteProfiles TCP domain profile. 34 88 IPR017887 -
Vium8158g00025 251 MobiDBLite consensus disorder prediction 1 22 - -
Vium8158g00025 251 MobiDBLite consensus disorder prediction 131 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8158g00025 Vium-Chr8158 116349 118266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8158g00025 12 251 TCP Transcription Factor Family AT5G23280 66.122 1.07e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vium8158g00025 TCP 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8158g00025 K16221 - gmx:100799005 402.519