Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8158g00001 ATGGGAGAGGTTAAAGTGCTTGGGTTTTGGTCTAGCCCTTTCGTTCATAGGGTGATATGGGCTCTGAAGTTAAAGGGCATTAGTTATGAGTACATAGAGATTGACAGACACAACAAAGGCGACCTACTTCTGCAATCCAATCCAGTTTACAAGAAAGTCCCAGTGCTTATTCATGGAGGCAGAGCCATTCCAGAGTCTATGGTCATCCTTGAATACATCGAAGACACATGGCCACACAACCCATTGCTGCCAAAAGACAACCATCAGAAAGCCTTAGCTCGCTTTTGGATTAAATTTGGAGAAGATTCGATCGCCTCTATCACTGATATGTTTCTCCGACCTTACAAAGATGAACAAGAAAGAGCAAGTGCATGGAAAAGAGCACAAGAAACTATAACAGTAATCGAAGAGCAAGGTCTAGGGGAGAAGAAATTCTTTGGAGGCAACAACATTGGAATGGTGGACATAGCATATGGATGCCTAAGCCATTGGTTGGAAGGCTTGGAGGAAATTGTTGGGTTGAAATTAATTGAACCCAACAGATTTCCTCGGTTGCATGCGTGGACACAAAACTTCAAACAAGTTCCTGTCATCAAAGAAAACCTTCCGGATTATGGGAAACTGTTGATACATCTTCAATGGCGCAGGCAGCAATAA 657 0.4292 MGEVKVLGFWSSPFVHRVIWALKLKGISYEYIEIDRHNKGDLLLQSNPVYKKVPVLIHGGRAIPESMVILEYIEDTWPHNPLLPKDNHQKALARFWIKFGEDSIASITDMFLRPYKDEQERASAWKRAQETITVIEEQGLGEKKFFGGNNIGMVDIAYGCLSHWLEGLEEIVGLKLIEPNRFPRLHAWTQNFKQVPVIKENLPDYGKLLIHLQWRRQQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8158g00001 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 204 IPR045073 -
Vium8158g00001 218 FunFam Putative glutathione S-transferase 1 83 - -
Vium8158g00001 218 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Vium8158g00001 218 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Vium8158g00001 218 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Vium8158g00001 218 Gene3D Glutaredoxin 1 82 - -
Vium8158g00001 218 CDD GST_N_Tau 4 77 - -
Vium8158g00001 218 Pfam Glutathione S-transferase, C-terminal domain 119 190 - -
Vium8158g00001 218 Gene3D - 83 218 - -
Vium8158g00001 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vium8158g00001 218 CDD GST_C_Tau 88 215 IPR045074 GO:0004364|GO:0006749
Vium8158g00001 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 218 IPR010987 -
Vium8158g00001 218 SFLD Glutathione Transferase (cytosolic) 1 217 IPR040079 -
Vium8158g00001 218 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Vium8158g00001 218 FunFam Tau class glutathione S-transferase 83 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8158g00001 Vium-Chr8158 110 1101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8158g00001 3 218 Glutathione S-transferase Gene Family AT2G29420 42.593 4.27e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8158g00001 K00799 - gmx:547586 399.823