Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium813g00006 ATGCCAAGTGTGGCCGTCAAGCTCTACAGCGTGTTCTTCAAGTTCCTCTTGAAGCACCGTTTGCAGAACCGGATCCAAACCTCTTCCCAACACTCCGACTCATTCGGTATTACCACCCGACCCGAAGAAGTTGTAGCCGCCGCTAATCCCTCCTTCGCCGACGGCGTCGCCACAAAAGACATCCACATCGACCCCTTAGCCTCTCTCTCCATCCGAATCTTCCTCCCCGAATCGGCCCTCAACGCTCCCGAGTCTCGTTCCAAACCTAGGACTCGCTCCATTCCCGAGCCTCAGCCTCGATCCGCTCACCTCGATTCAATCACACGGAGGAAAAGCTATGGTCCGCCTCTCCTGGAGGAGCGCCGGAGCAACAGCTTCGGAGGGGGCTCCGGCGTGGAGTGTTTGAACCTGATGACGGAAGGCACGTACCTCGGCTACTCGCCGCCGTCGGTGGCGCAGGGGGAGAGGCGGAGGCTACCTGTTGTCCTGCAGTTCCACGGAGGGGGGTGGGTTAGCGGAGGTAGCGATTCGGTGGCGAACGATATTTTCTGCCGGCGGATTGCCGAGTTATGTGATGTGATAGTGATTGCAGTGGGGTACCGGCTGGCGCCGGAAAACCGGTACCCGGCGGCGTTTGAGGACGGCGTGAAGGTGCTGAATTGGCTGGCGAAGCAGGCAAATTTGGCCGAATGTAGCAGGTCGATGAGTGGTGGGAGGAGTGGTGGGCATGGTGGTGGTAGTGGTGGTGGGGAGTTCAAGAAATCGGATGCTCATAAGCATATTGTTGGTTCCTTTGGGGCTTCTGTGGTTGAGCCTTGGCTGGCTGCTCATGGTGATCCTTCAAGATGTGTTCTTCTTGGAGCAAGTTGTGGTGCCAATATTGCAGACTATGTAGCTCGTAAAGCTGTGGAAGGAGGCAAACTTCTGGACCCTGTCAAGGTGGTAGCACAGGTTCTACTGTATCCATTTTTCATAGGAAGTGTTCCCACACGGTCTGAAATAAAGTTGGCAAACTCTTACTTTTATGACAAGGCCATGTGTATGCTTGCATGGAAACTTTTCCTACCTGAGGGGGAATTTAGTTTGGACCATCCATCTGCTAATCCCCTTGTCCCGGGACGGGGTCCTCCTTTAAAATTGATGCCTCCGACATTGACGGTTGTGGCCGAACATGACTGGATGAGGGATCGTGCCATTGCATACTCAGAGGAGCTCCGAAAGGTGAACGTGGATGCACCTGTTCTTGAGTATAAGGATGCGGTACATGAATTTGCAACACTTGATGTCCTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAAGACATAGCCATATGGATGAAGAAACATATTTCTCTTCGGGGTCATGAATTCTCATATTGA 1383 0.5358 MPSVAVKLYSVFFKFLLKHRLQNRIQTSSQHSDSFGITTRPEEVVAAANPSFADGVATKDIHIDPLASLSIRIFLPESALNAPESRSKPRTRSIPEPQPRSAHLDSITRRKSYGPPLLEERRSNSFGGGSGVECLNLMTEGTYLGYSPPSVAQGERRRLPVVLQFHGGGWVSGGSDSVANDIFCRRIAELCDVIVIAVGYRLAPENRYPAAFEDGVKVLNWLAKQANLAECSRSMSGGRSGGHGGGSGGGEFKKSDAHKHIVGSFGASVVEPWLAAHGDPSRCVLLGASCGANIADYVARKAVEGGKLLDPVKVVAQVLLYPFFIGSVPTRSEIKLANSYFYDKAMCMLAWKLFLPEGEFSLDHPSANPLVPGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWMKKHISLRGHEFSY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium813g00006 460 Pfam alpha/beta hydrolase fold 162 425 IPR013094 GO:0016787
Vium813g00006 460 SUPERFAMILY alpha/beta-Hydrolases 53 451 IPR029058 -
Vium813g00006 460 Gene3D alpha/beta hydrolase 13 457 IPR029058 -
Vium813g00006 460 PANTHER ARYLACETAMIDE DEACETYLASE 53 425 - -
Vium813g00006 460 MobiDBLite consensus disorder prediction 82 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium813g00006 Vium-Chr813 45804 49353 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium813g00006 1 460 Carbohydrate Esterase AT3G27320 70.779 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium813g00006 - - gmx:100791894 765.377