Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium812g00049 ATGAAGAAGTCCTGTGGTTTGAGAGGTTACTACCTTTGTCTAATCAATATGTTCATGTTGCTTTTGGTAGCAAGATCCCAACTGACATCAGATTTCTATAGCTCATCATGTCCTAACCTTTCAAAAATAGTAAGGAGAGAGGTTCAAAAAGCTCTCATGAATGAGATGCGAATGGCTGCTTCTTTGCTTCGCCTTCACTTTCATGATTGCTTTGTCAACGGTTGTGATGGGTCAATACTGCTAGATGGTGGTGATGATGCAGAGAAGTCTGCTATTCCTAATCTGAACTCTGTTAGAGGATATGAGGTTGTAGATACAATCAAAAGTTCAGTGGAGAGTGCATGCAGTGGGGTCGTCTCCTGTGCGGATATATTAGCCATCGCTGCCAGAGATTCTGTTCTCCTAAGTGGTGGACCTTCTTGGAAGGTTTTGCTAGGACGAAGAGATGGCACGTTATCAAACGGAACACTGGCAAATACTGCTCTTCCTGCGCCATTTGATCCACTGGATACCATCATTGCAAAGTTTACTGATGTAGGCCTTAATCTCACAGATGTTGTTTCTTTATCAGGTGCCCATACCATTGGCCGAGCAAGGTGTACTTTTTTTAGCAATAGATTGTCCAACTTCTCAGGAACAGGTGCACCAGACACCACATTAGACACTGCCATGCTCTCTGACCTGCAAAGTTTGTGTCAAAATGGAGATGGAAACGCAACTGCAGTTCTTGATAGAAACTCATCTGATCTATTTGACAACCACTACTTCAAGAACTTGGTCAGTGGAAAGGGGCTTCTCAGTTCTGACCAGATTCTATTTTCTAGTGATGAGGCTAATTCAACCTCTAAACCTTTGGTGGAAAGCTATATCAACAATAGTGGCCTCTTCTTCGGGGACTTTGTCAATTCTATGATCAAAATGGGGAACATAAATCCAAAGACTGGTTCCAATGGAGAGATTAGGAAGAACTGCCGAGTGATAAATTCCTAG 990 0.4263 MKKSCGLRGYYLCLINMFMLLLVARSQLTSDFYSSSCPNLSKIVRREVQKALMNEMRMAASLLRLHFHDCFVNGCDGSILLDGGDDAEKSAIPNLNSVRGYEVVDTIKSSVESACSGVVSCADILAIAARDSVLLSGGPSWKVLLGRRDGTLSNGTLANTALPAPFDPLDTIIAKFTDVGLNLTDVVSLSGAHTIGRARCTFFSNRLSNFSGTGAPDTTLDTAMLSDLQSLCQNGDGNATAVLDRNSSDLFDNHYFKNLVSGKGLLSSDQILFSSDEANSTSKPLVESYINNSGLFFGDFVNSMIKMGNINPKTGSNGEIRKNCRVINS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium812g00049 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vium812g00049 329 Gene3D - 32 328 - -
Vium812g00049 329 FunFam Peroxidase 163 307 - -
Vium812g00049 329 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 Gene3D Peroxidase, domain 2 163 307 - -
Vium812g00049 329 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PANTHER PEROXIDASE 72-RELATED 18 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 FunFam Peroxidase 31 167 - -
Vium812g00049 329 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vium812g00049 329 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Vium812g00049 329 ProSiteProfiles Plant heme peroxidase family profile. 27 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium812g00049 329 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium812g00049 Vium-Chr812 314029 315674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium812g00049 1 328 Peroxidase AT5G19890 61.446 2.62e-144 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium812g00049 K00430 - gmx:100787073 573.548