Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium812g00022 ATGCTTACGTGCATAGCTCGTCCGAAGAAACCTGATGAGTCAGATCCAAACAACGCGACAACCGCTGCTAAATCGCAAGCCATCAAATCCCTTACTTCTCAGATAAGGGATATGGCGTTGAAGGCTTCGGGTGCGTACAAGCATTGCGCTCCGTGCACAGGGCCAGCGGCGCAGGTGCGAGTGCGGGGCAACACCGAGTCGGACGCGGACTCCGACCGGTTCCGGTGGTCGTACCGGCGGACAGGGAGTTCAAGCTCGACGACGACTCGGACGTGGGGGAAGGAGATGGAGGCGCGGCTAAAGGGGATATCGAGCGGGGAGGGGACGCCAAACTCCGCGAGCGGACGGCGAGCGGAGCCGTTGGTGCTGTTCGTGGAAGAGAACGAGCCGAAGGAGTGGGTGGCCCAGGTGGAGCCTGGCGTTCTGATTACCTTCGTGTCGTTGCCAGGTGGCGGTAACGATCTCAAACGCATACGGTTCAGTCGAGAGATGTTCAATAAATGGCAAGCACAAAGGTGGTGGGCAGACAACTACGACAAAGTTATGGAACTTTACAATGTTCAAAGGTTTAGCCGCCAAGCATTCCCTCTTCCAACGCCACCAAGATCTGAAGACGAGAGCACAAAGCTTGAATCAGCAGAAGCCAGTCCTGTAACACCTCCACTGACCAGGGAACGGTTACCTCGTACTATTTACCGTCCAACAGGGATGGGAATGGGATACTCATCCTCAGATTCATTTGATCATCAGTCAATGCAATCCCGGCATTTCTACGACTCAAATGGTTTGAACTCTACCCCAAAAGTCTCCACTATTAGTGCGGCCAAGACGGAGATATCATCAATGGATGCTTCTATCAGAAGTAGCTCATCCAGAGAGGCTGATCGCTCTGGTGATTTATCAATCAGCAATGCCAGTGAGTTGGAGACTGAGTGGGTTGAACAGGATGAACCTGGGGTTTACATTACAATCAGAGCATTGTCAGGCGGCGCAAGGGAGCTCAAACGAGTCAGGTTTAGCCGAGAAAAATTTGGAGAGATGCATGCTAGATTATGGTGGGAGGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1098 0.5264 MLTCIARPKKPDESDPNNATTAAKSQAIKSLTSQIRDMALKASGAYKHCAPCTGPAAQVRVRGNTESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRAEPLVLFVEENEPKEWVAQVEPGVLITFVSLPGGGNDLKRIRFSREMFNKWQAQRWWADNYDKVMELYNVQRFSRQAFPLPTPPRSEDESTKLESAEASPVTPPLTRERLPRTIYRPTGMGMGYSSSDSFDHQSMQSRHFYDSNGLNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSISNASELETEWVEQDEPGVYITIRALSGGARELKRVRFSREKFGEMHARLWWEENRARIHEQYL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium812g00022 365 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 365 IPR044532 -
Vium812g00022 365 MobiDBLite consensus disorder prediction 1 26 - -
Vium812g00022 365 Pfam Transcription factor regulating root and shoot growth via Pin3 131 185 IPR013591 -
Vium812g00022 365 Pfam Transcription factor regulating root and shoot growth via Pin3 309 364 IPR013591 -
Vium812g00022 365 ProSiteProfiles BRX domain profile. 131 186 IPR013591 -
Vium812g00022 365 MobiDBLite consensus disorder prediction 196 222 - -
Vium812g00022 365 ProSiteProfiles BRX domain profile. 310 365 IPR013591 -
Vium812g00022 365 Pfam Transcription factor BRX N-terminal domain 20 52 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium812g00022 Vium-Chr812 140259 146054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium812g00022 1 365 Major Intrinsic Protein MIP AT1G31880 44.588 2.74e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium812g00022 - - gmx:100794109 662.144