Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8112g00001 ATGAATGAGAAGAGAAATTCGAAGCGTCCAAAATCACTGCCTTACAACATGCCTGTGACAGACTCAAATGAACCGCAGAATTTTGATGATAACATTCTTTTCCCCGTTGAAGAGATTGTACAATACCCATTGCCCGGATACGTGTCACCAACTTCAATAAGTTTTAGTCCTGATGATAGTTTAATCTCTTACTTGTTTAGTCCTGATCACTCTTTAAACAGAAAAATTTATGCTTTTGATCTGAAGACCAATGCACAAGAATTGTTATTTAGTCCCCCAGATGGTGGACTAGATGAAAGTAATATTTCTCCAGAAGAAAAGTTGAGGAGGGAGAGGTTGAGGGAGCGTGGTTTAGGCGTGACACGATATGAATGGGTGAAGACAAGCTCGAAAAGGAAAGCAGTCGTTGTGCCATTGCCTGCTGGGATTTATATTCAGGACCTTTCCCTTTCAAAACCAGAGCTCAAGCTTCCATGTGTATCAGGTTCACCCATTATTGATCCACATCTCTCTCCAGATGGATCAATGCTTGCCTTTGTAAGAGATTGTGAGTTGCATGTTCTGAATCTCTTGTCAAATGAATCAAAGCAGTTGACCCGTGGGGCAAAGGAACATGGTTTGATTCATGGGCTTGCAGAATATATAGCTCAGGAGGAGATGGATAGAAAAACTGGATATTGGTGGTCACTGGACAGTAAATATATTGCTTTCACCGAAGTTGATTCTTCTGAAATACCACTTTTTAGAATTATGCACCAAGGGAAGAGCTCAGTTGGTTTAGAGGCACAGGAAGACCACCCTTATCCTTTTGCAGGAGCTTCAAATGTTAAAGTGCGCCTTGGGGTTGTTGCAATAGCTGGAGGCTCCATTACTTGGATGGATCTTCAATGTGGGGGCAGGGAACAGCAAAACAACGAGGAGGAATATTTGGCAAGAGTCAATTGGATGCATGGAAACATTCTCACCGCTCAGATCTTGAACAGACACCACACGAAAATAAAGATTGTTAAATTTGACATTAAAACAGGCAAAAAGAAAAATTTGTTAGTGGAAGAAAACGGCAATTGGATCAATATACACGACTGTTTCACACCTCTTGATAAAGGAGTTACCAAATTTTCAGGTGGATTTATCTGGGCTAGTGAAAAAACAGGATTTAGGCATCTTTATCTTCATGATGCAAACGGGGTTTGTTTAGGATCCATCACTGAAGGTGAATGGATGGTTGAGCAAATTGCTGGAGTGAATGAAGCTACAGGTCTAATATACTTTACTGGGACCTTAGATGGTCCCCTGGAGTCCAATTTGTATTGTACTAAACTTTTCATTGATGGAAGTCAACCACTTCAGGTCCCTGTCAGACTTACACACAGCAAGGGGAAGCATATTGTGGTCCTTGATCATCATATGCGAAATTTTGTTGATATTCATGATTCTCTTGGTTGTCCTCCTAGGGTGTTACTGTGCTCATTGGAAGATGGAAGTGTAATCAAGCCTTTATATGAGCAGTCATTTACAGTTCCAAGGTTCAAAAAACTTCAACTTGAGGCGCCAGAGATTATTGAAATACAGGCTAATGATGGCACTACACTGTATGGAGCTTTATATAAGCCTGATGCTTCAAGGTTTGGACCTCCACCTTACAAAACTATGATCAATGTTTATGGTGGTCCAAGTGTACAGCTTGTCAGTAACTCTTGGCTCAGTACAGTTGATCTGAGAGCACAATATTTGAGAAACCAAGGCATCTTAGTTTGGAAGTTAGACAATAGAGGAACTGCAAGACGAGGGTTGAAATTCGAAAGCTATCTAAAACACAAACTTGGTCAAATTGATGCTGATGATCAGCTAACTGGAGCAGAGTGGCTTGTGAAACAAGGGCTTGCAAAAGCTGGTCACATAGGGTTGTATGGTTGGAGCTATGGTGGGTATCTCTCTGCAATGACACTGTCGAGATATCCAGATTTCTTCAAGTGTGCAATAGCTGGCGCCCCTGTTACATCATGGGATGGATATGACACGTTTTACACAGAGAAGTACATGGGGTTGCCATCTGAAAACAAGTCAGGCTATGAAAGTGGTTGTGTTATGAATCAAGTGCACCAGTTGAAAGGGCGGTTGTTGCTTGTGCATGGCATGATTGATGAGAATGTTCACTTCAGGCACACTGCAAGGCTTATCAATGCTCTTGTGGCAGCTGGAAAGCCATATGAGCTAATAGTTTTCCCAGATGAACGCCACATGCCGCGGCGTCACAGTGATCGAGTTTACATGGAAGGGAGGATGTGGGACTTCATTCAGAGGAATCTGTAA 2313 0.4198 MNEKRNSKRPKSLPYNMPVTDSNEPQNFDDNILFPVEEIVQYPLPGYVSPTSISFSPDDSLISYLFSPDHSLNRKIYAFDLKTNAQELLFSPPDGGLDESNISPEEKLRRERLRERGLGVTRYEWVKTSSKRKAVVVPLPAGIYIQDLSLSKPELKLPCVSGSPIIDPHLSPDGSMLAFVRDCELHVLNLLSNESKQLTRGAKEHGLIHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGLEAQEDHPYPFAGASNVKVRLGVVAIAGGSITWMDLQCGGREQQNNEEEYLARVNWMHGNILTAQILNRHHTKIKIVKFDIKTGKKKNLLVEENGNWINIHDCFTPLDKGVTKFSGGFIWASEKTGFRHLYLHDANGVCLGSITEGEWMVEQIAGVNEATGLIYFTGTLDGPLESNLYCTKLFIDGSQPLQVPVRLTHSKGKHIVVLDHHMRNFVDIHDSLGCPPRVLLCSLEDGSVIKPLYEQSFTVPRFKKLQLEAPEIIEIQANDGTTLYGALYKPDASRFGPPPYKTMINVYGGPSVQLVSNSWLSTVDLRAQYLRNQGILVWKLDNRGTARRGLKFESYLKHKLGQIDADDQLTGAEWLVKQGLAKAGHIGLYGWSYGGYLSAMTLSRYPDFFKCAIAGAPVTSWDGYDTFYTEKYMGLPSENKSGYESGCVMNQVHQLKGRLLLVHGMIDENVHFRHTARLINALVAAGKPYELIVFPDERHMPRRHSDRVYMEGRMWDFIQRNL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8112g00001 770 SUPERFAMILY DPP6 N-terminal domain-like 46 509 - -
Vium8112g00001 770 Gene3D alpha/beta hydrolase 519 770 IPR029058 -
Vium8112g00001 770 Pfam Prolyl oligopeptidase family 571 770 IPR001375 GO:0006508|GO:0008236
Vium8112g00001 770 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 138 484 IPR002469 GO:0006508
Vium8112g00001 770 SUPERFAMILY alpha/beta-Hydrolases 518 770 IPR029058 -
Vium8112g00001 770 Gene3D - 35 511 - -
Vium8112g00001 770 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 35 768 - -
Vium8112g00001 770 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8112g00001 Vium-Chr8112 27254 33098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8112g00001 457 768 Carbohydrate Esterase AT5G36210 23.148 3.70e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8112g00001 K01278 - gmx:100812178 1481.08