Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium808g00001 ATGGACAAATTCCGCCGCAGCAACTCCAACCACCAACCTTCTCTTACTCAAGCTCCGAGGAACAAACAGGTTCATAGACAACGACTACCTCCGAATCTGTCACCTGATTCTTGTTCAGGCGGTGGTGTTGCTGCAGAGAAAGATTCGTTTTCTCACAAATTTGGTTGGAGATCTTCGAAAAAACTGCTTGGAACACCGATTAAGAAGTTATTAGACGAAGAGATGTCACCGAAATCTGAATCAAAAAGAAGATCCCCTGGAGTCATCGCCAGATTGATGGGTCTTGATGGACTGCCATTTCAGCAGCCTATTAATAAGCAGCATAAGGGTTTATCTGAAAACCACCAGAAGACTCCACAATTGCAGAAAACACGCGGCAAAGGAGTGCCATATGACTGTGGTTCATCTAGGAGAGGCTTAAGGGATCACCAAGAATTTAAGGATGTATTTGAGGTTTCTGAGATTCCAAAGGTAGAGAGCAGTAGATATCCGTCGCCAGGGTGTGTAGACTTGAAGACCAATGATGCTGAAATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTCATCAAGATTTACAGTCTTCAAAGGACTTCCGAGACACACTTGAGGTTTTGGATTCTAACAAGGATCTTCTGCTGAAATACTTTAAGCGGCCAGATTCTTTGTTTAAAAAGCATCTAAATGATCTTCAAACTGTTCCGGTTCAATCACATTACAGACATGCAGAAACTATGGATATCGAGAAGTATGAAGATGACTTAAGTTGGAGGTCAGATAGGGAGAAAACACGGTTGAACTACAATAGATCTCATGAAAAGCANTACTGA 843 0.4223 MDKFRRSNSNHQPSLTQAPRNKQVHRQRLPPNLSPDSCSGGGVAAEKDSFSHKFGWRSSKKLLGTPIKKLLDEEMSPKSESKRRSPGVIARLMGLDGLPFQQPINKQHKGLSENHQKTPQLQKTRGKGVPYDCGSSRRGLRDHQEFKDVFEVSEIPKVESSRYPSPGCVDLKTNDAEMSFIEQKFMDAKRLATHQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQTVPVQSHYRHAETMDIEKYEDDLSWRSDREKTRLNYNRSHEKXY 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium808g00001 280 Pfam DUF761-associated sequence motif 79 99 IPR032795 -
Vium808g00001 280 Pfam Protein of unknown function (DUF3741) 182 226 IPR022212 -
Vium808g00001 280 MobiDBLite consensus disorder prediction 65 89 - -
Vium808g00001 280 MobiDBLite consensus disorder prediction 66 85 - -
Vium808g00001 280 MobiDBLite consensus disorder prediction 1 51 - -
Vium808g00001 280 MobiDBLite consensus disorder prediction 8 34 - -
Vium808g00001 280 PANTHER AFADIN 25 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium808g00001 Vium-Chr808 15103 17299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium808g00001 64 265 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 46.047 1.56e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium808g00001 - - vum:124823519 573.163