Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8043g00013 ATGGGCTTCCGTATACCAGCTATTCAAAGGCCATCATCAGTCACAGCTAGGCAAGCAGCTTCAAAATCTGTAGAAGTCCCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGAAACAGACACGATTTGTGATTCCCATATCATATTTGAACCAACCTTCATTTCAAGACTTACTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCCAACATATAGATTCTCGCTTGAATAGAAAATAA 282 0.4184 MGFRIPAIQRPSSVTARQAASKSVEVPKGYLAVYVGEKQTRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQHIDSRLNRK 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8043g00013 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 90 IPR003676 GO:0009733
Vium8043g00013 93 Pfam Auxin responsive protein 15 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8043g00013 Vium-Chr8043 69158 69741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8043g00013 15 86 Calmodulin-binding Proteins AT3G43120 48.611 7.90e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8043g00013 K14488 - gmx:106798972 156.762