Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8043g00011 ATGGGCTTCCGCTTACCCGGTATTAGAAGATCATCTTTTGCTGTCACCAAAGCAGCTTCCAAGGCTGTGGAGGTCCCAAAAGGCTATCTAGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTCGTGATTCCTATTTCATACTTGAATCAACCTTTATTTCAAGAATTGTTGAGCCAAGCTGAGGAAGAATTCGGGTATGCCCATCCAATGGGTGGTATCACAATTCCTTGCAGGGAAGAGGCTTTCTTAGATCTCACTTCTCGTTTGAATAGGCTATAA 279 0.4373 MGFRLPGIRRSSFAVTKAASKAVEVPKGYLAVYVGEKMKRFVIPISYLNQPLFQELLSQAEEEFGYAHPMGGITIPCREEAFLDLTSRLNRL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8043g00011 92 Pfam Auxin responsive protein 15 88 IPR003676 GO:0009733
Vium8043g00011 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8043g00011 Vium-Chr8043 57232 57780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8043g00011 24 82 Calmodulin-binding Proteins AT3G43120 55.932 3.39e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8043g00011 - K14488 gmx:100806671 174.481