Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8043g00010 ATGGGTTTTCGTTTACCAGGTAGCAAAAAAACATTATTTGCAGTCAGTCAAGCGTCTTCAAGAGCAGTGAATGCACCAAAAGGCTATCTTGCGGTGTATGTTGGAGAGAAAATGAAGCGGTTTGTGATTCCTCTATCATACTTGAACCAGCCTTTGTTCCGAGAATTGTTGAGTCAAGCTGAAGAGGAGTTTGGATATAATCATCCCATGGGCGGCCTCACAATTCCTTGCAGCGAAGATAGCTTCCAACATATAACTTCATGCTTGAATGTGATATAA 279 0.4158 MGFRLPGSKKTLFAVSQASSRAVNAPKGYLAVYVGEKMKRFVIPLSYLNQPLFRELLSQAEEEFGYNHPMGGLTIPCSEDSFQHITSCLNVI 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8043g00010 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
Vium8043g00010 92 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8043g00010 Vium-Chr8043 55440 56571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8043g00010 24 89 Calmodulin-binding Proteins AT3G43120 50.000 3.54e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8043g00010 K14488 - gmx:100793401 162.155