Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8043g00009 ATGGTGCCTCGTGATCAAGTATTCAATGTTGGTTCTCTTATATCCAAGCGCTGTTTAAGAGCTGGCAATCAACTATGGTCAATTCTCAAGGTTTACAGCTACTGCTCAATGAATGAACAAGCATTACATTTCACCACTGCTGATGTATCTAAGTTCAAAGCAAAAAATACAATGGGTTTCCGCATACCAGGTATTATTAGACAACCATCATTTTCTGCTGTCAAAGAAAACAAGGGACTTGAAGTTCCAAAAGGCCATCTTGCAGTGTATGTTGGAGATAAGATGAGGCGGTTTGTGATTCCAGTATCTTTGTTAAATCAACCCTCTTTTCAAGAATTGCTAAGTCGAGCAGAAGAAGAGTTTGGATATGATCATCCAGCTGGTGGTCTTACAATTCCATGCAAGGAGGATGAGTTTCTACATCATGTTATAATGGTGCTCGGATAG 447 0.396 MVPRDQVFNVGSLISKRCLRAGNQLWSILKVYSYCSMNEQALHFTTADVSKFKAKNTMGFRIPGIIRQPSFSAVKENKGLEVPKGHLAVYVGDKMRRFVIPVSLLNQPSFQELLSRAEEEFGYDHPAGGLTIPCKEDEFLHHVIMVLG 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8043g00009 148 Pfam Auxin responsive protein 76 144 IPR003676 GO:0009733
Vium8043g00009 148 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 78 141 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8043g00009 Vium-Chr8043 54226 55061 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8043g00009 81 139 Calmodulin-binding Proteins AT3G43120 55.932 5.79e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8043g00009 - K14488 gmx:100782363 145.976