Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8043g00008 ATGGCTTCACTTCACCTCTATATATACAAGTCTGCATTTTCTTCTGATACCAATTCGAGCCATAAAACATTTTATCAATTCATATTAAACTTTGGTTCATATCTATCCTTCTGCATCATGAAGACTGGTAACAGATTTGTGGGGATAGCTAATGCCAAGCAGAAACTTCAGAGAACTCTTTCACAGAGAATCAAAATGGCTTCTGCTGTTGCTGATGTTCCAAAAGGGCATTTGGCAGTGTACGTTGGAGAGAACCATAAGAGGTTTGTGATTCCAATATCTTACCTAAGCCACCCTTTGTTCAGAGACTTGTTGGATTGGGCTGAAGAAGAATTCGGATTCAACCATCCAATGGGTGGTCTCACTATTCCATGCACTGAACATTACTTCATTACTCTAACTTCTTCTCTTAGTTGA 417 0.3909 MASLHLYIYKSAFSSDTNSSHKTFYQFILNFGSYLSFCIMKTGNRFVGIANAKQKLQRTLSQRIKMASAVADVPKGHLAVYVGENHKRFVIPISYLSHPLFRDLLDWAEEEFGFNHPMGGLTIPCTEHYFITLTSSLS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8043g00008 138 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 62 137 IPR003676 GO:0009733
Vium8043g00008 138 Pfam Auxin responsive protein 61 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8043g00008 Vium-Chr8043 50254 50943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8043g00008 72 130 Calmodulin-binding Proteins AT5G20810 64.407 1.34e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8043g00008 K14488 - gmx:100781277 196.823