Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium803g00052 ATGGTGAATGCTATCTGTGGTGTGTATGGCTTGTGCACTTCTCTTGACAATGAATCAATCAAGTGTGAGTGTATTCCAGGTTATATCCCTTTGGATGATCAAGATGTTTCCAAAGGGTGTCACCCACCAGCTGTCATTAATTACTGTGCAGAGAACAACTTCAAGCTCCAGGTCTTTGACGACACTGATTTCTATTTTGATACTCATCTTGTTAGCTTAGCTAGCGTTGACTTCGAAAGTTGTAAGAAGGATGTAATAGATGATTGTAACATTGTTGCTGCAACTTATGACCATTCCACCTCCACATGTGCTAAGAAGAGACTGCCCTTGCTGAATGCTAGAAATAACTCTTCCTCAAAGGGATTGAAAGCACTGCTTAAAGTTGCTAACAGGATTGAGTCTGGGACATCTGAACTTCCTAAGAAGAAATGTTTTAATGTAAGAGTCTTTTTGAAGGTTCTTGTTGCAGTTACTGCAACTCTTGCATGTTTCTTTGGTGCACTTGCCGTCTACTATCATCCTTTCACTCGGAGACTTACAAGGAAAAAGAAGCATCTGAATGCAACAACTATTAGAATCAACTTCAGAGAATTTACCTTTCAGGAACTGCATGAAGCAACAGACGGATTTACTAAGATTCTTGGAAAGGGAGCTTCTGGAAAAGTCTATCGTGATGCTTTAGTAATAGGTGATGCAGAGATTGATGTTGCAGTAAAGAAACTGGAAAAGAAAATAGAAAAAAGTGATAGTGAATTCACTACCGAGCTCAAAATTATTGGTCGTACTCATCACAGAAATTTGGTGAGGCACTCAAGTTCAGAAAAAAAACAGTAG 834 0.3909 MVNAICGVYGLCTSLDNESIKCECIPGYIPLDDQDVSKGCHPPAVINYCAENNFKLQVFDDTDFYFDTHLVSLASVDFESCKKDVIDDCNIVAATYDHSTSTCAKKRLPLLNARNNSSSKGLKALLKVANRIESGTSELPKKKCFNVRVFLKVLVAVTATLACFFGALAVYYHPFTRRLTRKKKHLNATTIRINFREFTFQELHEATDGFTKILGKGASGKVYRDALVIGDAEIDVAVKKLEKKIEKSDSEFTTELKIIGRTHHRNLVRHSSSEKKQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium803g00052 277 SUPERFAMILY Protein kinase-like (PK-like) 185 270 IPR011009 -
Vium803g00052 277 ProSiteProfiles Protein kinase domain profile. 208 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium803g00052 277 Gene3D Phosphorylase Kinase; domain 1 190 275 - -
Vium803g00052 277 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 269 - -
Vium803g00052 277 Pfam Protein tyrosine and serine/threonine kinase 211 269 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium803g00052 Vium-Chr803 425297 426130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium803g00052 140 269 Receptor kinase-like Gene Family AT2G43700 36.154 3.43e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vium803g00052 PK_Tyr_Ser-Thr 2.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium803g00052 - - vum:124823457 560.836