Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium803g00024 ATGATGTTTCTGCATTCTTTGTGGTTCATCCTGTTTGCAGCTTTGTTGGGTGGATATGCATTTGTCTTTGGATTTCTTTGGAGAGTGAATGAATGGTACTATGTTTCAAGGGTGGGAAGAAACATGCAACACCCTCTTCCACCCGGTCATCTGGGTTGGCCTTTCTTGGGAAACATGCTCACCTTCTTCAAAGCTTTCAAATCTGATCCTGATTTTTTTATCTATGATCTTGTTTTCAGATATGGCAGGACTGGTATGTACAGAACATTCTTATTTGGAAGCCCTAGCATCATCGTATGCACCCCAGAGACATGTCGTAGGGTTCTCACAGATGATGAACAACTGAAGCTTGGATACCCTGCTTCCACCACCTCCCTCTTTGGAAAGAGATCGTTCCATGGCATCTCAAATGAGGAACACAAGCGTCTTCGTCGCTTAACCACCTCTCCCATAACTGGCCACGAGGCATTGTCCATGTACGTAGGTCTCATAGAAGATGCTTCTGTCAAACTGCTGGAAGAGTTGTCTAGCATGAGCACTCCTTCTGAGTTCCTCACAGAGTTGAGAAAGTTCGCTTTTAAGATCATCACCACCATTTTCATGGGCTCTGATGTTCACCATGTGGATCTTGGCTTGGTCGAAAACTTGTACAGAGATTTCAGTCGCGGAATTAAGTCACTGCCTATCAATCTCCCAGGCTTTGCATTCTATAAAGCAGTCAAGGCACGAAAGAAGTTGACGAAGTTGCTGCAAGGTGTGGTGGAGCTAAAGAGAAGGAGCAACAGTAGAAAAAGAAAGACGAAAAGGGATATGATGGATTCATTGATGGAAGTGAAAGATGAAGAGGGTAAGCAGCTGGAGGACGAAGACATTATAGACTTACTTCTGGTGTTCTTGTTAGCTGGCCACGAAAGTTCTGCTCATGGAATATTGTGGACTATCATCTACCTCACACAACACTCACATTTCTTCCAAAGGGCTAAGAAAGAACAAGAAGAGATCATGCAAGCAAGACCCTCCACTCAGAAAGGACTGAACATAAAGGAAATTAAGCAAATGGAATATCTTTCAAAGGTTATTCATGAGATGCTGCGCAAAACATCTATCTCGTTTGCGAACTTTAGACAGGCAAAGGTTGACCTCAGCATCAATGGTTTTACTATACCAAAAGGATGGAAAGTTCTGGTTTGGAACCGAGGGGTGCATATGGACCCTGAAACTTACAACAATCCAAAGGAATTCAATCCTTCCAGATGGGAAAATAACACAGCAAGAGCAGGTTCTTTTATTCCATTTGGATTAGGAAGCAGATTTTGTCCTGGGAGCGACCTGGCCAAACTTGAGATCACCATTTTCCTCCATCATTTTCTTCTTAACTACAGGATGGAGAGAGTTAACCCAGATTGTCGAATCACTTATCTACCATTGCAAAGGCCCTTAGATAACTGCTCTGCAAGAATTATAAAACTCACATAA 1476 0.4289 MMFLHSLWFILFAALLGGYAFVFGFLWRVNEWYYVSRVGRNMQHPLPPGHLGWPFLGNMLTFFKAFKSDPDFFIYDLVFRYGRTGMYRTFLFGSPSIIVCTPETCRRVLTDDEQLKLGYPASTTSLFGKRSFHGISNEEHKRLRRLTTSPITGHEALSMYVGLIEDASVKLLEELSSMSTPSEFLTELRKFAFKIITTIFMGSDVHHVDLGLVENLYRDFSRGIKSLPINLPGFAFYKAVKARKKLTKLLQGVVELKRRSNSRKRKTKRDMMDSLMEVKDEEGKQLEDEDIIDLLLVFLLAGHESSAHGILWTIIYLTQHSHFFQRAKKEQEEIMQARPSTQKGLNIKEIKQMEYLSKVIHEMLRKTSISFANFRQAKVDLSINGFTIPKGWKVLVWNRGVHMDPETYNNPKEFNPSRWENNTARAGSFIPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMERVNPDCRITYLPLQRPLDNCSARIIKLT 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium803g00024 491 SUPERFAMILY Cytochrome P450 45 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vium803g00024 491 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 Gene3D Cytochrome P450 36 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium803g00024 491 PANTHER CYTOCHROME P450 26 44 475 - -
Vium803g00024 491 Pfam Cytochrome P450 47 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium803g00024 Vium-Chr803 168087 170491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium803g00024 7 487 Cytochrome P450 AT1G05160 52.147 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium803g00024 K04123 K17875 gmx:100775911 672.544