Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium803g00019 ATGGAGAGTATGCGGCTCACACTCTTCTTAATGGGTATTTTGTTAAATGCTACAACTCTAAGAGGAGTGAAACTTCTTGTTCATGACTACTACGAGGAGAAGTGTCCCTTAGCCGAAGACATCGTGAGACATAACGTGGAGGTGGCACTTTTGAACAATCCTCGTTTGGCAGCCTCTCTACTACGCTTACACTTCCACGATTGTTTTGTCATGGGTTGTGATGCATCGGTGCTTCTGGACAGCGTGGAGGGCATGACAAGTGAAAAACTGGCTGGGCCAAATGTGAACTCTTTACATGGGTTTGAGTTGATAGACAAGATAAAGTATTTGCTGGAAGAGGAATGTCCTATTACTGTTTCATGTGCAGACATCCTTGCCATGGCTGCACGTGATGCAGTTCAATTGAGAGGAGGACCAAGATGGGAGGTGTTGCTAGGAAGGAAGGATTCTCTGGAGTCGAGTTTCAGTGGAGCTAACCTTTTCATTCCTGCTCCAAATTCCTCTCTAGAGGTTCTCATAGATAACTTCAAGCAACAAGGCCTTGACATAGAAGACTTGGTAACTCTATCAGGTAGTCATACTATAGGAAGAGCAAGATGCCTAAACTTCAGGCAGAGGATATATGAATCAGAAGATGAATATCACCATGGCAATGATCGCTACAAGCGGTACACAACCTTCAGGAGAATTCTGCGGTCCATTTGCCCTGTTGAGGGAAGGGACAACAAATTTGCACCCCTTGATTTGCAGACCCCAGAAAGGTTTGACAATCAGTATTTTATAAACATTCTTGGAGGGAATGGCTTGTTGGGTTCTGATAATGTTCTTATCAGCCAGGATTTGGATGGAAAGATTACAGAGCATGTGTGGGCTTATGCCTCCAACGAAAAACTATTCTTTGCTTCATTTGCTAAATCTATGATTAAGATGGGAAATATCAATGTTCTTACAGGTGATGAAGGAGAAATTAGGAGGAATTGTAGATTTGTCAATGCATAG 999 0.4294 MESMRLTLFLMGILLNATTLRGVKLLVHDYYEEKCPLAEDIVRHNVEVALLNNPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMTSEKLAGPNVNSLHGFELIDKIKYLLEEECPITVSCADILAMAARDAVQLRGGPRWEVLLGRKDSLESSFSGANLFIPAPNSSLEVLIDNFKQQGLDIEDLVTLSGSHTIGRARCLNFRQRIYESEDEYHHGNDRYKRYTTFRRILRSICPVEGRDNKFAPLDLQTPERFDNQYFINILGGNGLLGSDNVLISQDLDGKITEHVWAYASNEKLFFASFAKSMIKMGNINVLTGDEGEIRRNCRFVNA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium803g00019 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vium803g00019 332 PANTHER PEROXIDASE 72-RELATED 26 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 SUPERFAMILY Heme-dependent peroxidases 27 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 ProSiteProfiles Plant heme peroxidase family profile. 25 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 FunFam Peroxidase 163 310 - -
Vium803g00019 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vium803g00019 332 FunFam Peroxidase 29 177 - -
Vium803g00019 332 CDD secretory_peroxidase 26 330 IPR033905 GO:0004601|GO:0042744
Vium803g00019 332 Gene3D Peroxidase, domain 2 163 310 - -
Vium803g00019 332 Pfam Peroxidase 43 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 Gene3D - 30 331 - -
Vium803g00019 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium803g00019 332 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium803g00019 Vium-Chr803 117147 118620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium803g00019 85 331 Peroxidase AT2G35380 65.992 7.17e-120 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium803g00019 K00430 - gmx:100778051 590.882