Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium803g00007 | ATGGTTTGCACTGCCAATGATTTACAAGGATGGAAAGATTTTCCAAAGGGACTCAGGGTTCTTGTACTTGACGGAGATAGAAGTTCTGCTGCTGAAATAGGAGAACAACTTGAGGCCATGGACTATCATGTTTCTACCTTCTATGACGAGAACGAAGCTTTGTCAGCAGTCTCAAGTAGCCCTGAAGACTTCCATGTTGCCATAGTGGAGGTGAGTACAAGCAGCAGCCTTGGAGGTTTCAAATTTCTTGAGAATGCAAAGGACTTGCCTACCATTATGATTTCAAAGAACCAGTGCCTGAACACCACGATGAAGTGCATTGCGCTTGGTGCCGTTGAGTTTCTCAGTAAACCACTCTCTGAGGACAAGCTCAAAAATATTTGGCAGCATGTTGTTCACAAGGCCTTTAATTCTAGGGCAAATGGTCTGTCTGAGTCACTAAAACCTGTCAAAGAATCTGTAGAATCAGTGCTGCAGCTTCAAACAGGCAATGAACAAGATAAAACTCATAAAAGAACCATGTCGATTGATTTAGAGAATGTGTCCAGATTTGGTGATAATGTCAATGAGCAATCTGTATGTGATAAATATCCGGCTCCTTCAACCCCACAATTGAAACATGGGACACGGTTATTGGATGATGGAGATTGCCATGAGCAGACTAATTTCTCAACAGAAAAAGAAAGTGGAGAACATGATGGGGAATGCAAATCAGTCGAAACTTCATGTGAGAATTTGAATGCTGAAAGTACTCCTCAACCAACTGAACCTGAGGAGACTCTGATTAAGGAGGAAGAGGATTTTGCCAATGGTTCCAAGGGCGAGAGAGCTGTTTCACTGAATCTACAGAATGAAAAGTTTCTCAGCAATGCAGATGGTCATACATCTCCAAAAAAGATGGGAGTTTTTAATGATTCATGTGAGATTAAAGCTAACAGGAAGAAGATGAAATGTGCAGTTTCTACCTTCTATGACGAGAACGAAGCTTTGTCAGCAGTCTCAAGTAGCCCTGAAGACTTCCATGTTGCCATAGTGGAGGTGAGTACAAGCAGCAGCCTTGGAGGTTTCAAATTTCTTGAGAATGCAAAGGACTTGCCTACCATTATGATTTCAAAGAACCAGTGCCTGAACACCACGATGAAGTGCATTGCGCTTGGTGCCGTTGAGTTTCTCAGTAAACCACTCTCTGAGGACAAGCTCAAAAATATTTGGCAGCATGTTGTTCACAAGGCCTTTAATTCTAGGGCAAATGGTCTGTCTGAGTCACTAAAACCTGTCAAAGAATCTGTAGAATCAGTGCTGCAGCTTCAAACAGGCAATGAACAAGATAAAACTCATAAAAGAACCATGTCGATTGATTTAGAGAATGTGTCCAGATTTGGTGATAATGTCAATGAGCAATCTGTATGTGATAAATATCCGGCTCCTTCAACCCCACAATTGAAACATGGGACACGGTTATTGGATGATGGAGATTGCCATGAGCAGACTAATTTCTCAACAGAAAAAGAAAGTGGAGAACATGATGGGGAATGCAAATCAGTCGAAACTTCATGTGAGAATTTGAATGCTGAAAGTACTCCTCAACCAACTGAACCTGAGGAGACTCTGATTAAGGAGGAAGAGGATTTTGCCAATGGTTCCAAGGGCGAGAGAGCTGTTTCACTGAATCTACAGAATGAAAAGTTTCTCAGCAATGCAGATGGTCATACATCTCCAAAAAAGATGGGAGTTTTTAATGATTCATGTGAGATTAAAGCTAACAGGAAGAAGATGAAAGTAGACTGGACGCCCGAGCTGCATAAAAATTTTGTGAAGGCAGTTGAACAACTAGGTATTGATCAAGCCATTCCTTCTAGAATATTGGAGATAATGAAAGTGGAAGGATTGACAAGGCACAATGTGGCAAGCCATCTTCAGAAATATAGAATGCACAGGAGACAGAGTGCACCTGGGGAAGAAGATCGAAAATGGCACAATCAAAGAGATGCAATGCAAAGGAATTTTTATCTGCAAAGACCAATCATGGCCTACCCTCCCTATCACTCTAATCAAACCATTTCTCCAGCACCTATATATCCTATGTGGGGACAACCAGGAAGTCAAACAGCTGCTGTACAGATTTGGGGGCCTCCTGCGTACCCCTTGTGGCATCCTACAGAAAGTTGGAACTGGAAGCCTTATCCGGGGATGCATGTGGATGCTTGGGGATGCCCATTGTTCCCACCTCCTCAAGCTCCTGGTTTTCACTTCAATCAAAATATACCTGGATTGCACACTCCTAAACCAGTGGATTACAGATTCAGCATGCCGCGTAGTTCCTTTGAGCATCATCCGGCAGAGGAGGTGGTAGACAAGGTTGTGAAAGAAGCAATTAACAAGCCATGGCTACCATTGCCCTTAGGACTCAAAGCTCCTTCCACGGATAGTGTGTTAGCTGAGCTCTCCAAACAAGGCATATCTAGCATCCCTCTTGGCAACAAGGGTTCTTCTGCTCCAAAACCCTGCATTCAGGTAGACTGGACGCCCGAGCTGCATAAAAATTTTGTGAAGGCAGTTGAACAACTAGGTATTGATCAAGCCATTCCTTCTAGAATATTGGAGATAATGAAAGTGGAAGGATTGACAAGGCACAATGTGGCAAGCCATCTTCAGAAATATAGAATGCACAGGAGACAGAGTGCACCTGGGGAAGAAGATCGAAAATGGCACAATCAAAGAGATGCAATGCAAAGGAATTTTTATCTGCAAAGACCAATCATGGCCTACCCTCCCTATCACTCTAATCAAACCATTTCTCCAGCACCTATATATCCTATGTGGGGACAACCAGGAAGTCAAACAGCTGCTGTACAGATTTGGGGGCCTCCTGCGTACCCCTTGTGGCATCCTACAGAAAGTTGGAACTGGAAGCCTTATCCGGGGATGCATGTGGATGCTTGGGGATGCCCATTGTTCCCACCTCCTCAAGCTCCTGGTTTTCACTTCAATCAAAATATACCTGGATTGCACACTCCTAAACCAGTGGATTACAGATTCAGCATGCCGCGTAGTTCCTTTGAGCATCATCCGGCAGAGGAGGTGGTAGACAAGGTTGTGAAAGAAGCAATTAACAAGCCATGGCTACCATTGCCCTTAGGACTCAAAGCTCCTTCCACGGATAGTGTGTTAGCTGAGCTCTCCAAACAAGGCATATCTAGCATCCCTCTTGGCAACAAGGGTTCTTCTGCTCCAAAACCCTGCTGA | 3246 | 0.4378 | MVCTANDLQGWKDFPKGLRVLVLDGDRSSAAEIGEQLEAMDYHVSTFYDENEALSAVSSSPEDFHVAIVEVSTSSSLGGFKFLENAKDLPTIMISKNQCLNTTMKCIALGAVEFLSKPLSEDKLKNIWQHVVHKAFNSRANGLSESLKPVKESVESVLQLQTGNEQDKTHKRTMSIDLENVSRFGDNVNEQSVCDKYPAPSTPQLKHGTRLLDDGDCHEQTNFSTEKESGEHDGECKSVETSCENLNAESTPQPTEPEETLIKEEEDFANGSKGERAVSLNLQNEKFLSNADGHTSPKKMGVFNDSCEIKANRKKMKCAVSTFYDENEALSAVSSSPEDFHVAIVEVSTSSSLGGFKFLENAKDLPTIMISKNQCLNTTMKCIALGAVEFLSKPLSEDKLKNIWQHVVHKAFNSRANGLSESLKPVKESVESVLQLQTGNEQDKTHKRTMSIDLENVSRFGDNVNEQSVCDKYPAPSTPQLKHGTRLLDDGDCHEQTNFSTEKESGEHDGECKSVETSCENLNAESTPQPTEPEETLIKEEEDFANGSKGERAVSLNLQNEKFLSNADGHTSPKKMGVFNDSCEIKANRKKMKVDWTPELHKNFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRMHRRQSAPGEEDRKWHNQRDAMQRNFYLQRPIMAYPPYHSNQTISPAPIYPMWGQPGSQTAAVQIWGPPAYPLWHPTESWNWKPYPGMHVDAWGCPLFPPPQAPGFHFNQNIPGLHTPKPVDYRFSMPRSSFEHHPAEEVVDKVVKEAINKPWLPLPLGLKAPSTDSVLAELSKQGISSIPLGNKGSSAPKPCIQVDWTPELHKNFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRMHRRQSAPGEEDRKWHNQRDAMQRNFYLQRPIMAYPPYHSNQTISPAPIYPMWGQPGSQTAAVQIWGPPAYPLWHPTESWNWKPYPGMHVDAWGCPLFPPPQAPGFHFNQNIPGLHTPKPVDYRFSMPRSSFEHHPAEEVVDKVVKEAINKPWLPLPLGLKAPSTDSVLAELSKQGISSIPLGNKGSSAPKPC | 1081 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium803g00007 | 1081 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 588 | 647 | IPR017930 | - | |
| Vium803g00007 | 1081 | SUPERFAMILY | Homeodomain-like | 839 | 892 | IPR009057 | - | |
| Vium803g00007 | 1081 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 841 | 892 | IPR017930 | - | |
| Vium803g00007 | 1081 | SMART | REC_2 | 18 | 128 | IPR001789 | GO:0000160 | |
| Vium803g00007 | 1081 | Pfam | Myb-like DNA-binding domain | 840 | 888 | IPR001005 | - | |
| Vium803g00007 | 1081 | Pfam | Myb-like DNA-binding domain | 594 | 643 | IPR001005 | - | |
| Vium803g00007 | 1081 | MobiDBLite | consensus disorder prediction | 468 | 489 | - | - | |
| Vium803g00007 | 1081 | FunFam | Two-component response regulator | 587 | 649 | - | - | |
| Vium803g00007 | 1081 | FunFam | Two-component response regulator-like APRR2 | 17 | 142 | - | - | |
| Vium803g00007 | 1081 | ProSiteProfiles | Response regulatory domain profile. | 19 | 132 | IPR001789 | GO:0000160 |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vium803g00007 | - | - | vum:124823451 | 2198.7 |
Showing 1 to 1 of 1 entries