Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium8021g00001 ATGGTGAGTGTATTCATTATGAGGCGCACCGACCTCCCCGCCCGTGACCTCCGCATATTGGACCCTCTCCTCTCCTACCCTTCCACCCTTCTTGGCCGTGAGAGGGCCATCGTCATCAACTTGGAGCGCATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCACGTGACCCCTCCGTCACCCCCTTCGTCCAAGAGCTCCAGGCCAGGATCCTCCGCCACCACCAGGCCTTCTCTTCCAAACATCACGACCACCACACCGACTCCGACCCCGACCACGACCACGTCCCCGATGCCATCAAGATTCTCCCTTTCGAATTCGTGGCCCTGGAGGCCTGCCTTGAAGCCGCCTGTAGCGTATTGGAGAACGAGGTCCGTGCTTCCCTCTTCTCTTCTTTTCATTTCTTGCCGACAATTTCCCTCTGTCTTTACCCTAAATCTCTCTCTGATGACTCACAGGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACATCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTGGTCGCCATCACTGGCCGTGTTCAGAAGGTGAGGGATGAATTGGAGCACTTGCTGGACGACGACGATGATATGGCTGAGATGTATCTGACGGATAAAATTGTGGTCTCAGAGTGTGGTGAACTTTCATTAGCTGATGTGCTTAGTGAGAGATTGCAAGTGGTTGTAGAAGCAATTGATCAGTCGTGCCAAGATCG 764 0.5393 MVSVFIMRRTDLPARDLRILDPLLSYPSTLLGRERAIVINLERIKAIITAHEVLLLNSRDPSVTPFVQELQARILRHHQAFSSKHHDHHTDSDPDHDHVPDAIKILPFEFVALEACLEAACSVLENEVRASLFSSFHFLPTISLCLYPKSLSDDSQAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTDKIVVSECGELSLADVLSERLQVVVEAIDQSCQDR 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium8021g00001 255 Gene3D - 4 58 - -
Vium8021g00001 255 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 129 IPR039204 -
Vium8021g00001 255 Gene3D Magnesium transport protein CorA, transmembrane region 144 254 - -
Vium8021g00001 255 Gene3D Magnesium transport protein CorA, transmembrane region 61 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium8021g00001 Vium-Chr8021 4713 8329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium8021g00001 6 224 MRS2 Gene Family AT3G19640 60.729 5.65e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium8021g00001 - - gmx:100819578 266.929