Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7997g00001 ATGGGAACCTTTGGGTACATGGCACCAGAATATGCAACAAGTGGGAAACTAACGGAAAAGTCTGATGTATATTCCTACGGTGTTGTGCTTTTGGAGTTAATTACGGGTAGGAAGCCTGTAGATGCATCTCAACCAATCGGTGATGAGAGTCTGGTTGAATGGGCTCGGCCTTTGTTGAGTGAAGCACTTGAGAAGGAGGACTTTGAAATCTTGGTGGATCCAAGACTGGGAAAGAACTACGACAGAAATGAAATGTTCAGGATGATCGAGGGTGCTGCAGCCTGCGTACGCCACTCGTCGGTGAAGAGGCCACGGATGAGTCAGGTGGTGAGAGCTTTAGATTCCTTAGACGAGTTTACGGATCTGAATAATGGAATGAAACCGGGGCAGAGTTCGGTGTTTGATTCTGCACAGCAATCTGCACAGATCAGAATGTTTAGAAGGATGGCTTTTGGGAGCCAAGATAGTTCAAGTTTCTTCAATGAGTCTCAGAGTAGCTGGAGGAGTAGAGATCAGCACTCAGCAACCATGATTTCCCAAAACAAAACTGGGTCTTGGAATGTTTGA 567 0.4621 MGTFGYMAPEYATSGKLTEKSDVYSYGVVLLELITGRKPVDASQPIGDESLVEWARPLLSEALEKEDFEILVDPRLGKNYDRNEMFRMIEGAAACVRHSSVKRPRMSQVVRALDSLDEFTDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSSFFNESQSSWRSRDQHSATMISQNKTGSWNV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7997g00001 188 SUPERFAMILY Protein kinase-like (PK-like) 1 120 IPR011009 -
Vium7997g00001 188 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 161 IPR047117 -
Vium7997g00001 188 Gene3D Transferase(Phosphotransferase) domain 1 1 138 - -
Vium7997g00001 188 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium7997g00001 188 Pfam Protein tyrosine and serine/threonine kinase 5 112 IPR001245 GO:0004672|GO:0006468
Vium7997g00001 188 MobiDBLite consensus disorder prediction 162 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7997g00001 Vium-Chr7997 9673 11572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7997g00001 1 172 Trihelix Transcription Factor Family AT5G38560 78.857 1.09e-94 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Vium7997g00001 PK_Tyr_Ser-Thr 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7997g00001 - - vum:124846213 364.385