Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7995g00001 ATGGCTCTTCGAGTTCAACCATTATCCTCACTTTTAAAGGAATTGCCAAACCAGCTCAGTACCTCTTACATAGCCATTTTTTTCTTCTTCTTAACCCTCCTTTTTGTGCTTAATAACAAAAGAAGAAGAAACAAGTCCAATTTGCCTCCTTCCCCACCAAAACTACCCATAATTGGAAACCTTCATCAACTGGGCACTCTCCCACACCGCTCCTTCCAAACACTGTCTCGCAAGTATGGCCCTCTCATGTTTCTGCAATTAGGCCAAACTCCGACTCTTGTGGTTTCATCAGCTGATGTCGCCAAAGAAGTTTACAAAACCCATGATGTTGCTTTCTCCAATAAGCCTCAGACCACAGCCGTGAAAATCATCATGTATGGGTGCACGGACGTGGCTTTTTCACCCTACGGGGAAGAGTGGAGACAGAAAAGGAAGATCTGTGTTCTTGAGCTTCTAAGCATCAAAAGGGTGCGATCCTTTCAGTTCATTCGAGAGGAAGAAGTTGCAGCCATGCTTGGTGCCATACGTGAAGCATGCAGCGCGGGTAAAACGTCTTCTTGCGTGAACCTGACTGAGATTCTGATTGAAACCTCCAACAACATAATGTCTAGATGTGTTGTTGGAAGAAAGTACGATAACCCAGATGGTGGAATCAGCTTTGGAGAGCTAGGAAGGAAGATGATGAAACACCTAGCCACTTTCTCGGTGGGAGATTTCTTTCCTTTGTTAGGTTGGATTGACGTTCTTTCTGGCCAAATACCAGAATTTAAGGCCACTTTCAGGGCATTAGATTCTTTCTTTGATCAGTTAATTGCTGAACGCAAGAAAATAATGAAGATGGACAGTTACCAACCTCGTAACAAAGACTTCGTGGACTCACTCCTTCAGATTCAAGATGGTGCAGGAAACCATGATTTTCAGCTTACACACGATGACGTCAAGGCAATCCTAATGGACATATTTGCTGGAGGAAGTGACACCACTTCAACACTTCTGGAATGGGTATTTGCGGCGCTCTTGAATAATCCTGCTACCATGAAGAGAGCTCAAGAAGAAGTAAGAAGAGTTGTCGGGCAGAAACTAAAAGTGGAAGAGAATGATTTGAATGAAATGAGTTATCTGAAATGCGTAGTGAAAGAAACTCTGAGATTATATCCACCTGCTCCTCTTTTGATACCCCGAGAAACTTTATCCGATGTAAAAGTCAAAGGTTTCGATATTCCATCCAAAACAAGAGTGTTTGTGAATGCATGGGCGATTCAGAGGGACCCTGAAATTTGGAACAGGCCCGAAGAGTTTCTTCCCGAGAGATTTGAAGAAGAGCCCGAAGTTGATTTTAGAGGAAATGATTTGCAGCTTATTCCCTTTGGTTCTGGGAGAAGAGGGTGTATTGGAATTTCGTTTGCACTTGCTTCCACTGAGTTTATGCTTGCTAATCTCCTCTACTGGTTTGATTGGAAGATTCCTCATGAGAATGGTAAACCAGTGCAAGATGTAGACATGAGTGAGATATGGGGACTCACTGTCATCAAGAAACTACCACTTCATCTTCAACCTCAACTACACTCATTTGGTGTCTACAATTAA 1587 0.4297 MALRVQPLSSLLKELPNQLSTSYIAIFFFFLTLLFVLNNKRRRNKSNLPPSPPKLPIIGNLHQLGTLPHRSFQTLSRKYGPLMFLQLGQTPTLVVSSADVAKEVYKTHDVAFSNKPQTTAVKIIMYGCTDVAFSPYGEEWRQKRKICVLELLSIKRVRSFQFIREEEVAAMLGAIREACSAGKTSSCVNLTEILIETSNNIMSRCVVGRKYDNPDGGISFGELGRKMMKHLATFSVGDFFPLLGWIDVLSGQIPEFKATFRALDSFFDQLIAERKKIMKMDSYQPRNKDFVDSLLQIQDGAGNHDFQLTHDDVKAILMDIFAGGSDTTSTLLEWVFAALLNNPATMKRAQEEVRRVVGQKLKVEENDLNEMSYLKCVVKETLRLYPPAPLLIPRETLSDVKVKGFDIPSKTRVFVNAWAIQRDPEIWNRPEEFLPERFEEEPEVDFRGNDLQLIPFGSGRRGCIGISFALASTEFMLANLLYWFDWKIPHENGKPVQDVDMSEIWGLTVIKKLPLHLQPQLHSFGVYN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7995g00001 528 Pfam Cytochrome P450 49 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 Gene3D Cytochrome P450 34 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PANTHER CYTOCHROME P450 71B11-RELATED 33 519 - -
Vium7995g00001 528 FunFam Cytochrome P450 83B1 35 518 - -
Vium7995g00001 528 SUPERFAMILY Cytochrome P450 49 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 CDD CYP71-like 78 515 - -
Vium7995g00001 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vium7995g00001 528 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7995g00001 528 Coils Coil 346 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7995g00001 Vium-Chr7995 17196 19132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7995g00001 28 516 Cytochrome P450 AT3G48280 42.857 9.28e-140 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7995g00001 K20617 - gmx:100792382 604.364