Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7940g00001 ATGCCAACATTCTTCTCCTTTCAAACCTCGTTACTTGTTTCTCTTGCCCTAGCGCTTGCCCTTACACCAATAACAACAACGACAAAGTTCCAATTCCAGAACGCCCTCTCCTTTTCCCCACTCGCCACTCTCTTTGTCACCCTCTTCGCTGTTTCCCTTAACTACTGGCTTGTCCCTGGAGGTTTTGCATGGAGAAACTATCGATTCCAACATCATCCCAACAACGAAAAACCAGACGCAAAACTTTCTGGGCCTATGGGGTGGCCCATACTGGGCTCTCTGCCTCTAATGGGATCTCTGGCGCACGCCAAACTCGCTGCTTTAGCCGCGTCGTTAAACGCCAAGAGGATAATGGCGTTCAGCCTGGGACCCACTCCGGTTGTTATAAGCAGCCACCCCGAGACTGCCAGACAAATCTTATTCGGATCCTCCTTTTCGGATCGTCCCATAAAAGAATCCGCTCGCGCTCTCATGTTTGAGCGAGCCATTGGTTTCGCTCCTTCCGACACCTACTGGAGGCACCTTCGTAGGATTGCGGCGTTCCACATGTTCTCTCCGAGGAGGATTCAGGATTTGGAGGGCGTCCGGCAGCGAGTGGCTGAGGACATGGTGAAGAGCGCGTGGAAGGAGATGGAGGAGAAAGGGGTGGTGGAAGTTCGAGGCATACTTCAGGAAGGATCTCTGTTGAATATTTTGGAGAGTGTGTTTGGGAGTAATGATAAGAGTGAGGAGTTGGGTGGTATGGTTAAGGAAGGGTACGAGTTGATTGCGAAGTTCAACTTGGAAGATTATTTTCCTCTCAAGTTTTTGGACTTTCATGGGGTGAAGAGAAGGTGCCACAAGTTGGCCGCTAAGGTCGGTAGTGTTGTGGGGCAAATTGTGGAGGAGCGAAAACGAGATGGGAGTTTTGTTGGGAAGAATGATTTTCTTAGCACTTTGTTATCCTTACCCAAAGAAGAAAGGTTGGATGATTCAGATATGGTGGCTATTCTGTGGGAAATGGTATTTCGAGGAACAGACACGGTTGCAATACTCCTAGAATGGGTCATGGCCAGGATGGTTTTACACCAAGACGTACAAAAGAAAGCCCGGGAAGAAATCGACACGTGCATCAGCCAAAATCGTCACGTGCGAGACTCGGATATTGCGAACCTGCCTTACCTCCAGTCCATAGTGAAAGAAGTTCTCCGGCTGCACCCTCCGGGTCCACTACTCTCATGGGCCCGCCTCGCAGTCCACGATGTCTACGTGGATAAAGTACTTGTGCCAGCTGGCACAACAGCCATGGTTAACATGTGGGCAATATCACATGACTCGTCCATCTGGGAAGACCCATGGGCTTTCAAACCGGAGAGGTTCCTAACAGAAGACGTTTCCATCATGGGGTCGGACTTGAGGCTGGCCCCCTTCGGAGCTGGACGTAGGGTGTGTCCGGGAAGGGCCTTGGGCTTGGCCACGGCCCATCTCTGGCTCGCGCAACTTCTCCGCCACTTCACATGGCTCCCGGCGCAACATGTGGATCTTTCGGAATGCCTTAAGCTTTCCATGGAAATGAAGACCCCTCTGCGATGCGTAGTGGTTCGTAGATAA 1590 0.5126 MPTFFSFQTSLLVSLALALALTPITTTTKFQFQNALSFSPLATLFVTLFAVSLNYWLVPGGFAWRNYRFQHHPNNEKPDAKLSGPMGWPILGSLPLMGSLAHAKLAALAASLNAKRIMAFSLGPTPVVISSHPETARQILFGSSFSDRPIKESARALMFERAIGFAPSDTYWRHLRRIAAFHMFSPRRIQDLEGVRQRVAEDMVKSAWKEMEEKGVVEVRGILQEGSLLNILESVFGSNDKSEELGGMVKEGYELIAKFNLEDYFPLKFLDFHGVKRRCHKLAAKVGSVVGQIVEERKRDGSFVGKNDFLSTLLSLPKEERLDDSDMVAILWEMVFRGTDTVAILLEWVMARMVLHQDVQKKAREEIDTCISQNRHVRDSDIANLPYLQSIVKEVLRLHPPGPLLSWARLAVHDVYVDKVLVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLTEDVSIMGSDLRLAPFGAGRRVCPGRALGLATAHLWLAQLLRHFTWLPAQHVDLSECLKLSMEMKTPLRCVVVRR 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7940g00001 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Vium7940g00001 529 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 PRINTS E-class P450 group I signature 111 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 Pfam Cytochrome P450 84 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 Gene3D Cytochrome P450 68 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium7940g00001 529 CDD CYP78 115 522 - -
Vium7940g00001 529 FunFam Cytochrome P450 78A5 74 529 - -
Vium7940g00001 529 PANTHER CYTOCHROME P450 78A7-RELATED 29 529 - -
Vium7940g00001 529 SUPERFAMILY Cytochrome P450 84 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7940g00001 Vium-Chr7940 3940 6695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7940g00001 21 529 Cytochrome P450 AT1G13710 52.190 1.22e-180 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7940g00001 - - gmx:100817944 874.389