Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7917g00009 ATGAAGAATTGCGATGAATGGAAACCTTTCCTAGCAATGGTAGCTATTGATTTTTCTTTAACCATGGTGAACATCCTTCTCAAGCAAGTCCTCCAAAAAGGAATGAACCATTTGGTTTTTGTCACATATCGCCTGTCAGTTTCTACTATATTTTTAGCCCCCATCAGCTACTTTAAGGAAAGAAATAGAAGACCACGGCTCACATTTCAAATTTTATGCTACCTTTTCTTCAGTGCCATTATTGGGGCATCCGTCACACAATACTTCTTCCTTTTGGGGATCCAATATACCTCAGCCACATTTGCCTGTGCATTTGTCAATATGGTGCCGGTGATAACCTTCATCATGGCATTGCCATTTGGGCTAGAAACAGTGAACATTAAATGCTTGGGTGGGAAAGCGAAGATTCTGGGCACATTTGTGTGTGTAGGAGGGGCATTAGTGTTGACACTTTACAGAGGAAAACCCTTGTTTGATGTGTCTCACTATAAAGCAACGGTTCCTCCGGTAGCCATGAGATCTGAAGGTGGTTCTAGTGGTAGAACAGCACAGAAATGGAGCATTGGTGTAATAGCTTTGATGATGGGAACCCTGTTTTGGTCTTTTTGGTTTATTCTACAGTCAAAGATAGGGAAGAGGTATCCTTGCCAGTATTCTAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTGTCCACTGGCACCAACTTCTCCTCCTGGATTCTCAAGGATAAGATGCAAATAATCACTGTTCTTTATTCTGGGATAGTTGGGTCAAGTATGTGCTACGTGGGGATGTCATGGTGCGTGAAGAAGAGGGGTCCAGTCTTTACAGCAGCATTCAGCCCTCTGGTTCAGTTAATGTCGGGCATGATTGATATCCCAGTCTTGCACGAGCAGCTTCATCTTGGAAGTGTGGTGGGCTCCGTCTTGGTCATGATGGGCTTGTACATTCTCCTTTGGGGCAAAACCAAGGACATAGTGCAGAATACTGCCACTAAGTTGCTCCAAGAAACTCAGCAAACCAAGGAACAAGAACCACAAGTATAA 1068 0.4382 MKNCDEWKPFLAMVAIDFSLTMVNILLKQVLQKGMNHLVFVTYRLSVSTIFLAPISYFKERNRRPRLTFQILCYLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCLGGKAKILGTFVCVGGALVLTLYRGKPLFDVSHYKATVPPVAMRSEGGSSGRTAQKWSIGVIALMMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGLSTGTNFSSWILKDKMQIITVLYSGIVGSSMCYVGMSWCVKKRGPVFTAAFSPLVQLMSGMIDIPVLHEQLHLGSVVGSVLVMMGLYILLWGKTKDIVQNTATKLLQETQQTKEQEPQV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7917g00009 355 PANTHER WAT1-RELATED PROTEIN 8 337 IPR030184 GO:0016020|GO:0022857
Vium7917g00009 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Vium7917g00009 355 Pfam EamA-like transporter family 24 149 IPR000620 GO:0016020
Vium7917g00009 355 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020
Vium7917g00009 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7917g00009 Vium-Chr7917 56204 58457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7917g00009 7 260 Nodulin-like Gene Family AT3G30340 49.213 3.56e-86 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7917g00009 - - gmx:100791663 577.015