Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium7917g00001 ATGGATCTGGCAAAAAGCAAAGGTAGTGGTGAAGTTTTGGATCATGTTGATGAAAGGGTGGGTGAGGATTTGAACCAATTGGTTGAAGGAAATGCAATTGATGCAGGAGGTGGACATAGGTTGGATGAAAGAGTTAGTGTAAGTGGGGAAGATGAGACTACAGACCAGATGTGTAATGGTCTTGGTTTGAATGTGGAGCTAAAGGAGGGGCTGCAAGAAGTTAATGATCAGAACCTGGTTGGACCTCAAGAAATTAATGATACATTACATGGGGTTGATCAAGGAACCAGTTATAGTTCAAGAAATTTGGTTAGTGGGGAAGTACCTGAGACTTGTGTTGTAATAGATCCTTCCGCACAGATTGATTGTGTCAGTGGAGAAAATAGGAAATTGGAAGCAAAACCTAATGATTCAGGCTTGAGCAAGGTGTCCAAGAAAGTGACAAAAGGGGTGTCTGACATAGATAAAAATTCATGTGTGATTGATATAAACCGTGGCAGCTGCGACGGTTTTAGTGAAAATCTGGAAGGTGAATTGATTTGTAGGATTTGCCATCTGGCCTCTGGGCAACCATTAGAAGCAGAAGCTGTTGGCACTGTAAGTAGTGCTACAACTACGAATACAGATTTGATTCAGCTTGGTTGTGCTTGTAAAGATGAATTAGGCATTGCTCACAGTCATTGTGCTGAGGCATGGTTCAAGATTAAAGGAAACAGCTCGTTGCCGTTTCACTTTTCGCTGGTTACATCGCTAACTGGAGAACCAATATCATCCTTTTGCACCCTGACACATGGAGTTTTTAGTAGTAATTGA 813 0.417 MDLAKSKGSGEVLDHVDERVGEDLNQLVEGNAIDAGGGHRLDERVSVSGEDETTDQMCNGLGLNVELKEGLQEVNDQNLVGPQEINDTLHGVDQGTSYSSRNLVSGEVPETCVVIDPSAQIDCVSGENRKLEAKPNDSGLSKVSKKVTKGVSDIDKNSCVIDINRGSCDGFSENLEGELICRICHLASGQPLEAEAVGTVSSATTTNTDLIQLGCACKDELGIAHSHCAEAWFKIKGNSSLPFHFSLVTSLTGEPISSFCTLTHGVFSSN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium7917g00001 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 267 IPR013083 -
Vium7917g00001 270 PANTHER ZINC FINGER, RING-CH-TYPE 87 239 - -
Vium7917g00001 270 SMART ringv_2 180 240 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium7917g00001 Vium-Chr7917 1657 5044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium7917g00001 181 240 C3H Transcription Factor Family AT2G37950 43.333 2.59e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium7917g00001 - - vra:106779758 506.908